Cluster: CGMR027626_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR027626
- CGC Family ID: CGCFAM_03033
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_118562 | k141_118562_36 | 39908 | 40573 | - | 9.B.18.1.2 |
| pfam | k141_118562 | k141_118562_37 | 40584 | 42134 | - | Wzy_C |
| pfam | k141_118562 | k141_118562_38 | 42131 | 43309 | - | Aminotran_1_2 | DegT_DnrJ_EryC1 |
| CAZyme | k141_118562 | k141_118562_39 | 43309 | 44499 | - | GT4 |
| NULL(UNKNOWN) | k141_118562 | k141_118562_40 | 44503 | 45747 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_118562 | k141_118562_41 | 45766 | 47643 | - | 9.B.18.2.1 |
Gene ID: k141_118562_36
Type: TC
Location: 39908 - 40573 (-)
Type: TC
Location: 39908 - 40573 (-)
Gene ID: k141_118562_37
Type: pfam
Location: 40584 - 42134 (-)
Type: pfam
Location: 40584 - 42134 (-)
Gene ID: k141_118562_38
Type: pfam
Location: 42131 - 43309 (-)
Type: pfam
Location: 42131 - 43309 (-)
Gene ID: k141_118562_39
Type: CAZyme
Location: 43309 - 44499 (-)
Type: CAZyme
Location: 43309 - 44499 (-)
Gene ID: k141_118562_40
Type:
Location: 44503 - 45747 (-)
Type:
Location: 44503 - 45747 (-)
Gene ID: k141_118562_41
Type: TC
Location: 45766 - 47643 (-)
Type: TC
Location: 45766 - 47643 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Mycobacteriales
Family
Mycobacteriaceae
Genus
Corynebacterium
Species
Corynebacterium amycolatum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.