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Cluster: CGMR027592_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_494390 k141_494390_50 43947 45911 - GH13_39
CAZyme k141_494390 k141_494390_51 45911 48346 - GT35
CAZyme k141_494390 k141_494390_52 48366 49817 - GT5
pfam k141_494390 k141_494390_53 49814 50941 - NTP_transferase | Hexapep_GlmU
pfam k141_494390 k141_494390_54 50954 52144 - NTP_transferase | Hexapep_GlmU
CAZyme k141_494390 k141_494390_55 52144 54060 - GH13_9
pfam k141_494390 k141_494390_56 54076 55473 - PGI
pfam k141_494390 k141_494390_57 55721 55891 - DUF1540
TC k141_494390 k141_494390_58 55973 57592 - 3.A.1.5.27
CAZyme k141_494390 k141_494390_59 57558 58127 - GH23
Gene ID: k141_494390_50
Type: CAZyme
Location: 43947 - 45911 (-)
Gene ID: k141_494390_51
Type: CAZyme
Location: 45911 - 48346 (-)
Gene ID: k141_494390_52
Type: CAZyme
Location: 48366 - 49817 (-)
Gene ID: k141_494390_53
Type: pfam
Location: 49814 - 50941 (-)
Gene ID: k141_494390_54
Type: pfam
Location: 50954 - 52144 (-)
Gene ID: k141_494390_55
Type: CAZyme
Location: 52144 - 54060 (-)
Gene ID: k141_494390_56
Type: pfam
Location: 54076 - 55473 (-)
Gene ID: k141_494390_57
Type: pfam
Location: 55721 - 55891 (-)
Gene ID: k141_494390_58
Type: TC
Location: 55973 - 57592 (-)
Gene ID: k141_494390_59
Type: CAZyme
Location: 57558 - 58127 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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