Cluster: CGMR027422_CGC20
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR027422
- CGC Family ID: CGCFAM_00119
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_941244 | k141_941244_10 | 13151 | 13600 | + | 3.D.1.8.1 |
| pfam | k141_941244 | k141_941244_11 | 13754 | 14905 | + | Radical_SAM | HemN_C |
| CAZyme | k141_941244 | k141_941244_12 | 15040 | 19290 | + | GT3 | GT35 |
| CAZyme | k141_941244 | k141_941244_13 | 19375 | 21387 | + | GH133 |
| CAZyme | k141_941244 | k141_941244_14 | 21406 | 22704 | + | GT4 |
| CAZyme | k141_941244 | k141_941244_15 | 22719 | 23939 | + | GH57 |
Gene ID: k141_941244_10
Type: TC
Location: 13151 - 13600 (+)
Type: TC
Location: 13151 - 13600 (+)
Gene ID: k141_941244_11
Type: pfam
Location: 13754 - 14905 (+)
Type: pfam
Location: 13754 - 14905 (+)
Gene ID: k141_941244_12
Type: CAZyme
Location: 15040 - 19290 (+)
Type: CAZyme
Location: 15040 - 19290 (+)
Gene ID: k141_941244_13
Type: CAZyme
Location: 19375 - 21387 (+)
Type: CAZyme
Location: 19375 - 21387 (+)
Gene ID: k141_941244_14
Type: CAZyme
Location: 21406 - 22704 (+)
Type: CAZyme
Location: 21406 - 22704 (+)
Gene ID: k141_941244_15
Type: CAZyme
Location: 22719 - 23939 (+)
Type: CAZyme
Location: 22719 - 23939 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.