Cluster: CGMR027422_CGC2
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR027422
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_555063 | k141_555063_20 | 26366 | 27412 | + | 9.B.18.2.1 |
| STP | k141_555063 | k141_555063_21 | 27428 | 28540 | + | Aminotran_1_2 |
| pfam | k141_555063 | k141_555063_22 | 28547 | 28978 | + | Cupin_1 | FdtA | Cupin_2 | Polysacc_synt_C |
| CAZyme | k141_555063 | k141_555063_23 | 29205 | 30197 | + | GT4 |
| pfam | k141_555063 | k141_555063_24 | 30201 | 31472 | + | Wzy_C |
| CAZyme | k141_555063 | k141_555063_25 | 31480 | 32568 | + | GT4 |
| pfam | k141_555063 | k141_555063_26 | 32587 | 33687 | + | Glycos_transf_1 | Glyco_transf_4 | Glyco_trans_1_4 |
| CAZyme | k141_555063 | k141_555063_27 | 33717 | 34532 | + | GT2 |
| pfam | k141_555063 | k141_555063_28 | 34536 | 35114 | + | Hexapep | Hexapep_2 |
| STP | k141_555063 | k141_555063_29 | 35126 | 35803 | + | PIG-L |
| TC | k141_555063 | k141_555063_30 | 35815 | 36480 | + | 9.B.18.1.2 |
Gene ID: k141_555063_20
Type: TC
Location: 26366 - 27412 (+)
Type: TC
Location: 26366 - 27412 (+)
Gene ID: k141_555063_21
Type: STP
Location: 27428 - 28540 (+)
Type: STP
Location: 27428 - 28540 (+)
Gene ID: k141_555063_22
Type: pfam
Location: 28547 - 28978 (+)
Type: pfam
Location: 28547 - 28978 (+)
Gene ID: k141_555063_23
Type: CAZyme
Location: 29205 - 30197 (+)
Type: CAZyme
Location: 29205 - 30197 (+)
Gene ID: k141_555063_24
Type: pfam
Location: 30201 - 31472 (+)
Type: pfam
Location: 30201 - 31472 (+)
Gene ID: k141_555063_25
Type: CAZyme
Location: 31480 - 32568 (+)
Type: CAZyme
Location: 31480 - 32568 (+)
Gene ID: k141_555063_26
Type: pfam
Location: 32587 - 33687 (+)
Type: pfam
Location: 32587 - 33687 (+)
Gene ID: k141_555063_27
Type: CAZyme
Location: 33717 - 34532 (+)
Type: CAZyme
Location: 33717 - 34532 (+)
Gene ID: k141_555063_28
Type: pfam
Location: 34536 - 35114 (+)
Type: pfam
Location: 34536 - 35114 (+)
Gene ID: k141_555063_29
Type: STP
Location: 35126 - 35803 (+)
Type: STP
Location: 35126 - 35803 (+)
Gene ID: k141_555063_30
Type: TC
Location: 35815 - 36480 (+)
Type: TC
Location: 35815 - 36480 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.