Cluster: CGMR027422_CGC19
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR027422
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_389246 | k141_389246_12 | 14562 | 15182 | + | 9.B.171.1.4 |
| pfam | k141_389246 | k141_389246_13 | 15255 | 15959 | - | TsaD |
| pfam | k141_389246 | k141_389246_14 | 15962 | 16423 | - | SmpB |
| CAZyme | k141_389246 | k141_389246_15 | 16771 | 17745 | + | GH43_34 |
| pfam | k141_389246 | k141_389246_16 | 17821 | 18822 | - | F_bP_aldolase |
| TC | k141_389246 | k141_389246_17 | 18920 | 20272 | - | 2.A.22.5.3 |
| TC | k141_389246 | k141_389246_18 | 20499 | 21338 | + | 2.A.115.1.5 |
| TC | k141_389246 | k141_389246_19 | 21370 | 23580 | + | 3.A.11.3.1 |
Gene ID: k141_389246_12
Type: TC
Location: 14562 - 15182 (+)
Type: TC
Location: 14562 - 15182 (+)
Gene ID: k141_389246_13
Type: pfam
Location: 15255 - 15959 (-)
Type: pfam
Location: 15255 - 15959 (-)
Gene ID: k141_389246_14
Type: pfam
Location: 15962 - 16423 (-)
Type: pfam
Location: 15962 - 16423 (-)
Gene ID: k141_389246_15
Type: CAZyme
Location: 16771 - 17745 (+)
Type: CAZyme
Location: 16771 - 17745 (+)
Gene ID: k141_389246_16
Type: pfam
Location: 17821 - 18822 (-)
Type: pfam
Location: 17821 - 18822 (-)
Gene ID: k141_389246_17
Type: TC
Location: 18920 - 20272 (-)
Type: TC
Location: 18920 - 20272 (-)
Gene ID: k141_389246_18
Type: TC
Location: 20499 - 21338 (+)
Type: TC
Location: 20499 - 21338 (+)
Gene ID: k141_389246_19
Type: TC
Location: 21370 - 23580 (+)
Type: TC
Location: 21370 - 23580 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.