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Cluster: CGMR027208_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_270417 k141_270417_11 13250 14389 + GH88
CAZyme k141_270417 k141_270417_12 14419 18753 + PL35
pfam k141_270417 k141_270417_13 18787 21648 + SLH | SLH | SLH
NULL(UNKNOWN) k141_270417 k141_270417_14 21649 24279 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_270417 k141_270417_15 24345 25943 + 3.A.1.1.10
TC k141_270417 k141_270417_16 25969 26928 + 3.A.1.1.10
TC k141_270417 k141_270417_17 26942 27829 + 3.A.1.1.29
NULL(UNKNOWN) k141_270417 k141_270417_18 27914 31012 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_270417 k141_270417_19 31027 34560 + Hepar_II_III_C | Hepar_II_III_N | aBig_2 | CBM96
CAZyme k141_270417 k141_270417_20 34578 35843 + GH1
Gene ID: k141_270417_11
Type: CAZyme
Location: 13250 - 14389 (+)
Gene ID: k141_270417_12
Type: CAZyme
Location: 14419 - 18753 (+)
Gene ID: k141_270417_13
Type: pfam
Location: 18787 - 21648 (+)
Gene ID: k141_270417_14
Type:
Location: 21649 - 24279 (+)
Gene ID: k141_270417_15
Type: TC
Location: 24345 - 25943 (+)
Gene ID: k141_270417_16
Type: TC
Location: 25969 - 26928 (+)
Gene ID: k141_270417_17
Type: TC
Location: 26942 - 27829 (+)
Gene ID: k141_270417_18
Type:
Location: 27914 - 31012 (+)
Gene ID: k141_270417_19
Type: pfam
Location: 31027 - 34560 (+)
Gene ID: k141_270417_20
Type: CAZyme
Location: 34578 - 35843 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
UBA1381
→
Family
UBA1381
→
Genus
UBA4716
→
Species
UBA4716 sp934476675

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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