Cluster: CGMR027208_CGC28
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR027208
- CGC Family ID: CGCFAM_00058
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_72385 | k141_72385_36 | 51415 | 55137 | - | CE12 |
| CAZyme | k141_72385 | k141_72385_37 | 55181 | 58420 | - | PL35 |
| NULL(UNKNOWN) | k141_72385 | k141_72385_38 | 58458 | 61643 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_72385 | k141_72385_39 | 61658 | 64312 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_72385 | k141_72385_40 | 64309 | 68640 | - | CBM32 | PL35 |
| NULL(UNKNOWN) | k141_72385 | k141_72385_41 | 68637 | 71270 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_72385 | k141_72385_42 | 71292 | 72923 | - | SLH | SLH | SLH |
| TC | k141_72385 | k141_72385_43 | 72952 | 73830 | - | 3.A.1.1.10 |
| TC | k141_72385 | k141_72385_44 | 73883 | 74824 | - | 3.A.1.1.10 |
| TC | k141_72385 | k141_72385_45 | 74844 | 76400 | - | 3.A.1.1.10 |
| TF | k141_72385 | k141_72385_46 | 76810 | 79122 | + | HTH_AraC |
| CAZyme | k141_72385 | k141_72385_47 | 79152 | 79835 | + | CE6 |
Gene ID: k141_72385_36
Type: CAZyme
Location: 51415 - 55137 (-)
Type: CAZyme
Location: 51415 - 55137 (-)
Gene ID: k141_72385_37
Type: CAZyme
Location: 55181 - 58420 (-)
Type: CAZyme
Location: 55181 - 58420 (-)
Gene ID: k141_72385_38
Type:
Location: 58458 - 61643 (-)
Type:
Location: 58458 - 61643 (-)
Gene ID: k141_72385_39
Type:
Location: 61658 - 64312 (-)
Type:
Location: 61658 - 64312 (-)
Gene ID: k141_72385_40
Type: CAZyme
Location: 64309 - 68640 (-)
Type: CAZyme
Location: 64309 - 68640 (-)
Gene ID: k141_72385_41
Type:
Location: 68637 - 71270 (-)
Type:
Location: 68637 - 71270 (-)
Gene ID: k141_72385_42
Type: pfam
Location: 71292 - 72923 (-)
Type: pfam
Location: 71292 - 72923 (-)
Gene ID: k141_72385_43
Type: TC
Location: 72952 - 73830 (-)
Type: TC
Location: 72952 - 73830 (-)
Gene ID: k141_72385_44
Type: TC
Location: 73883 - 74824 (-)
Type: TC
Location: 73883 - 74824 (-)
Gene ID: k141_72385_45
Type: TC
Location: 74844 - 76400 (-)
Type: TC
Location: 74844 - 76400 (-)
Gene ID: k141_72385_46
Type: TF
Location: 76810 - 79122 (+)
Type: TF
Location: 76810 - 79122 (+)
Gene ID: k141_72385_47
Type: CAZyme
Location: 79152 - 79835 (+)
Type: CAZyme
Location: 79152 - 79835 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
UBA4716
Species
UBA4716 sp934476675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.