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Cluster: CGMR027208_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_9667 k141_9667_25 22214 24217 - 3.A.3.6.10
TF k141_9667 k141_9667_26 24689 26950 + HTH_AraC
STP k141_9667 k141_9667_27 27035 28609 + SBP_bac_1
TC k141_9667 k141_9667_28 28672 29571 + 3.A.1.1.20
TC k141_9667 k141_9667_29 29571 30506 + 3.A.1.1.36
CAZyme k141_9667 k141_9667_30 30524 33796 + CBM9 | GH39
pfam k141_9667 k141_9667_31 33877 36402 + Big_5
CAZyme k141_9667 k141_9667_32 36460 38778 + GH39
pfam k141_9667 k141_9667_33 38813 40429 + SLH | SLH | SLH
pfam k141_9667 k141_9667_34 40444 42969 + SLH | SLH
CAZyme k141_9667 k141_9667_35 43034 44509 + GH142
Gene ID: k141_9667_25
Type: TC
Location: 22214 - 24217 (-)
Gene ID: k141_9667_26
Type: TF
Location: 24689 - 26950 (+)
Gene ID: k141_9667_27
Type: STP
Location: 27035 - 28609 (+)
Gene ID: k141_9667_28
Type: TC
Location: 28672 - 29571 (+)
Gene ID: k141_9667_29
Type: TC
Location: 29571 - 30506 (+)
Gene ID: k141_9667_30
Type: CAZyme
Location: 30524 - 33796 (+)
Gene ID: k141_9667_31
Type: pfam
Location: 33877 - 36402 (+)
Gene ID: k141_9667_32
Type: CAZyme
Location: 36460 - 38778 (+)
Gene ID: k141_9667_33
Type: pfam
Location: 38813 - 40429 (+)
Gene ID: k141_9667_34
Type: pfam
Location: 40444 - 42969 (+)
Gene ID: k141_9667_35
Type: CAZyme
Location: 43034 - 44509 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
UBA1381
→
Family
UBA1381
→
Genus
UBA4716
→
Species
UBA4716 sp934476675

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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