Cluster: CGMR027208_CGC16
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR027208
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_147909 | k141_147909_10 | 9860 | 11602 | - | GH2 |
| TF | k141_147909 | k141_147909_11 | 11727 | 12509 | + | HTH_AraC | HTH_AraC |
| TC | k141_147909 | k141_147909_12 | 12654 | 13985 | + | 3.D.6.1.2 |
| TC | k141_147909 | k141_147909_13 | 13982 | 14929 | + | 3.D.6.1.2 |
| TC | k141_147909 | k141_147909_14 | 14931 | 15518 | + | 3.D.6.1.2 |
| TC | k141_147909 | k141_147909_15 | 15520 | 16122 | + | 3.D.6.1.2 |
| TC | k141_147909 | k141_147909_16 | 16123 | 16701 | + | 3.D.6.1.2 |
| STP | k141_147909 | k141_147909_17 | 16726 | 17541 | + | FeS | Fer4 | Fer4 | Fer4 |
| TC | k141_147909 | k141_147909_18 | 17619 | 19295 | + | 4.C.1.1.14 |
| CAZyme | k141_147909 | k141_147909_19 | 19341 | 20822 | - | GH77 |
| pfam | k141_147909 | k141_147909_20 | 20838 | 21485 | - | Hydrolase | HAD | Hydrolase_like | HAD_2 |
| pfam | k141_147909 | k141_147909_21 | 21689 | 23719 | + | Topoisom_bac | Toprim_Crpt |
| CAZyme | k141_147909 | k141_147909_22 | 23845 | 26682 | + | GH2 |
Gene ID: k141_147909_10
Type: CAZyme
Location: 9860 - 11602 (-)
Type: CAZyme
Location: 9860 - 11602 (-)
Gene ID: k141_147909_11
Type: TF
Location: 11727 - 12509 (+)
Type: TF
Location: 11727 - 12509 (+)
Gene ID: k141_147909_12
Type: TC
Location: 12654 - 13985 (+)
Type: TC
Location: 12654 - 13985 (+)
Gene ID: k141_147909_13
Type: TC
Location: 13982 - 14929 (+)
Type: TC
Location: 13982 - 14929 (+)
Gene ID: k141_147909_14
Type: TC
Location: 14931 - 15518 (+)
Type: TC
Location: 14931 - 15518 (+)
Gene ID: k141_147909_15
Type: TC
Location: 15520 - 16122 (+)
Type: TC
Location: 15520 - 16122 (+)
Gene ID: k141_147909_16
Type: TC
Location: 16123 - 16701 (+)
Type: TC
Location: 16123 - 16701 (+)
Gene ID: k141_147909_17
Type: STP
Location: 16726 - 17541 (+)
Type: STP
Location: 16726 - 17541 (+)
Gene ID: k141_147909_18
Type: TC
Location: 17619 - 19295 (+)
Type: TC
Location: 17619 - 19295 (+)
Gene ID: k141_147909_19
Type: CAZyme
Location: 19341 - 20822 (-)
Type: CAZyme
Location: 19341 - 20822 (-)
Gene ID: k141_147909_20
Type: pfam
Location: 20838 - 21485 (-)
Type: pfam
Location: 20838 - 21485 (-)
Gene ID: k141_147909_21
Type: pfam
Location: 21689 - 23719 (+)
Type: pfam
Location: 21689 - 23719 (+)
Gene ID: k141_147909_22
Type: CAZyme
Location: 23845 - 26682 (+)
Type: CAZyme
Location: 23845 - 26682 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1381
Family
UBA1381
Genus
UBA4716
Species
UBA4716 sp934476675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.