Cluster: CGMR026893_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR026893
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_26578 | k141_26578_104 | 127458 | 130466 | + | GH2 |
| NULL(UNKNOWN) | k141_26578 | k141_26578_105 | 130470 | 130925 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_26578 | k141_26578_106 | 131079 | 132542 | + | 2.A.3.7.4 |
| STP | k141_26578 | k141_26578_107 | 132964 | 133212 | + | PTS-HPr |
| STP | k141_26578 | k141_26578_108 | 133400 | 133642 | + | FeoA |
| TC | k141_26578 | k141_26578_109 | 133680 | 133901 | + | 9.A.8.1.6 |
| TC | k141_26578 | k141_26578_110 | 134025 | 136355 | + | 9.A.8.1.6 |
Gene ID: k141_26578_104
Type: CAZyme
Location: 127458 - 130466 (+)
Type: CAZyme
Location: 127458 - 130466 (+)
Gene ID: k141_26578_105
Type:
Location: 130470 - 130925 (+)
Type:
Location: 130470 - 130925 (+)
Gene ID: k141_26578_106
Type: TC
Location: 131079 - 132542 (+)
Type: TC
Location: 131079 - 132542 (+)
Gene ID: k141_26578_107
Type: STP
Location: 132964 - 133212 (+)
Type: STP
Location: 132964 - 133212 (+)
Gene ID: k141_26578_108
Type: STP
Location: 133400 - 133642 (+)
Type: STP
Location: 133400 - 133642 (+)
Gene ID: k141_26578_109
Type: TC
Location: 133680 - 133901 (+)
Type: TC
Location: 133680 - 133901 (+)
Gene ID: k141_26578_110
Type: TC
Location: 134025 - 136355 (+)
Type: TC
Location: 134025 - 136355 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp958348475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.