Cluster: CGMR026893_CGC25
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR026893
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_22754 | k141_22754_145 | 135511 | 136395 | - | CE7 |
| TC | k141_22754 | k141_22754_146 | 136569 | 137396 | - | 3.A.1.5.27 |
| TC | k141_22754 | k141_22754_147 | 137397 | 139412 | - | 3.A.1.5.25 |
| TC | k141_22754 | k141_22754_148 | 139416 | 140372 | - | 3.A.1.5.38 |
| TC | k141_22754 | k141_22754_149 | 140530 | 142143 | - | 3.A.1.5.27 |
| pfam | k141_22754 | k141_22754_150 | 142509 | 144449 | - | GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH |
| TC | k141_22754 | k141_22754_151 | 144456 | 146138 | - | 2.A.66.4.4 |
Gene ID: k141_22754_145
Type: CAZyme
Location: 135511 - 136395 (-)
Type: CAZyme
Location: 135511 - 136395 (-)
Gene ID: k141_22754_146
Type: TC
Location: 136569 - 137396 (-)
Type: TC
Location: 136569 - 137396 (-)
Gene ID: k141_22754_147
Type: TC
Location: 137397 - 139412 (-)
Type: TC
Location: 137397 - 139412 (-)
Gene ID: k141_22754_148
Type: TC
Location: 139416 - 140372 (-)
Type: TC
Location: 139416 - 140372 (-)
Gene ID: k141_22754_149
Type: TC
Location: 140530 - 142143 (-)
Type: TC
Location: 140530 - 142143 (-)
Gene ID: k141_22754_150
Type: pfam
Location: 142509 - 144449 (-)
Type: pfam
Location: 142509 - 144449 (-)
Gene ID: k141_22754_151
Type: TC
Location: 144456 - 146138 (-)
Type: TC
Location: 144456 - 146138 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp958348475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.