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Cluster: CGMR026893_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_33892 k141_33892_24 25918 27087 - CE9
STP k141_33892 k141_33892_25 27205 28371 - SIS | SIS
TF k141_33892 k141_33892_26 28486 29217 - GntR
TC k141_33892 k141_33892_27 29403 30485 - 4.A.6.1.4
TC k141_33892 k141_33892_28 30475 31275 - 4.A.6.1.4
TC k141_33892 k141_33892_29 31366 31848 - 4.A.6.1.4
pfam k141_33892 k141_33892_30 31885 32166 - YajC
TC k141_33892 k141_33892_31 32166 32609 - 4.A.6.1.16
Gene ID: k141_33892_24
Type: CAZyme
Location: 25918 - 27087 (-)
Gene ID: k141_33892_25
Type: STP
Location: 27205 - 28371 (-)
Gene ID: k141_33892_26
Type: TF
Location: 28486 - 29217 (-)
Gene ID: k141_33892_27
Type: TC
Location: 29403 - 30485 (-)
Gene ID: k141_33892_28
Type: TC
Location: 30475 - 31275 (-)
Gene ID: k141_33892_29
Type: TC
Location: 31366 - 31848 (-)
Gene ID: k141_33892_30
Type: pfam
Location: 31885 - 32166 (-)
Gene ID: k141_33892_31
Type: TC
Location: 32166 - 32609 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_33892_30 vegan > omnivore 1.01938 0.00863

🧭 Explore Read Mapping of CGC

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