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Cluster: CGMR026750_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_28344 k141_28344_237 252616 253344 + GT26
pfam k141_28344 k141_28344_238 253358 253996 + PS_Dcarbxylase
pfam k141_28344 k141_28344_239 253993 254661 + CDP-OH_P_transf
CAZyme k141_28344 k141_28344_240 254678 255931 + GT2
pfam k141_28344 k141_28344_241 255946 256716 + SurE
TC k141_28344 k141_28344_242 257050 258432 + 2.A.25.1.4
pfam k141_28344 k141_28344_243 259027 261009 + YadA_anchor | LbR_Ice_bind | LbR_Ice_bind
pfam k141_28344 k141_28344_244 261152 261580 + TatA_B_E
TC k141_28344 k141_28344_245 261570 262277 + 2.A.64.1.1
TC k141_28344 k141_28344_246 262411 265842 + 3.B.1.1.1
TC k141_28344 k141_28344_247 265915 267087 - 2.A.1.2.20
TC k141_28344 k141_28344_248 267239 268174 + 3.A.1.5.2
TC k141_28344 k141_28344_249 268171 269088 + 3.A.1.5.2
TC k141_28344 k141_28344_250 269085 270077 + 3.A.1.5.2
TC k141_28344 k141_28344_251 270068 271027 + 3.A.1.5.35
TC k141_28344 k141_28344_252 271024 272604 + 3.A.1.5.2
Gene ID: k141_28344_237
Type: CAZyme
Location: 252616 - 253344 (+)
Gene ID: k141_28344_238
Type: pfam
Location: 253358 - 253996 (+)
Gene ID: k141_28344_239
Type: pfam
Location: 253993 - 254661 (+)
Gene ID: k141_28344_240
Type: CAZyme
Location: 254678 - 255931 (+)
Gene ID: k141_28344_241
Type: pfam
Location: 255946 - 256716 (+)
Gene ID: k141_28344_242
Type: TC
Location: 257050 - 258432 (+)
Gene ID: k141_28344_243
Type: pfam
Location: 259027 - 261009 (+)
Gene ID: k141_28344_244
Type: pfam
Location: 261152 - 261580 (+)
Gene ID: k141_28344_245
Type: TC
Location: 261570 - 262277 (+)
Gene ID: k141_28344_246
Type: TC
Location: 262411 - 265842 (+)
Gene ID: k141_28344_247
Type: TC
Location: 265915 - 267087 (-)
Gene ID: k141_28344_248
Type: TC
Location: 267239 - 268174 (+)
Gene ID: k141_28344_249
Type: TC
Location: 268171 - 269088 (+)
Gene ID: k141_28344_250
Type: TC
Location: 269085 - 270077 (+)
Gene ID: k141_28344_251
Type: TC
Location: 270068 - 271027 (+)
Gene ID: k141_28344_252
Type: TC
Location: 271024 - 272604 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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