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Cluster: CGMR026750_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_28344 k141_28344_172 188555 189406 + 1.A.23.3.3
pfam k141_28344 k141_28344_173 189418 189621 + DUF951
pfam k141_28344 k141_28344_174 189826 190503 + Methyltransf_4
TC k141_28344 k141_28344_175 190508 191731 + 2.A.103.1.3
TC k141_28344 k141_28344_176 191749 193017 + 2.A.40.1.1
pfam k141_28344 k141_28344_177 193044 194153 + Radical_SAM
pfam k141_28344 k141_28344_178 194238 194819 + Chromate_transp
TC k141_28344 k141_28344_179 194831 195403 + 2.A.51.1.6
NULL(UNKNOWN) k141_28344 k141_28344_180 195609 195938 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_28344 k141_28344_181 196210 197184 + 2-Hacid_dh | 2-Hacid_dh_C | NAD_binding_2
CAZyme k141_28344 k141_28344_182 197229 198035 + CE4
Gene ID: k141_28344_172
Type: TC
Location: 188555 - 189406 (+)
Gene ID: k141_28344_173
Type: pfam
Location: 189418 - 189621 (+)
Gene ID: k141_28344_174
Type: pfam
Location: 189826 - 190503 (+)
Gene ID: k141_28344_175
Type: TC
Location: 190508 - 191731 (+)
Gene ID: k141_28344_176
Type: TC
Location: 191749 - 193017 (+)
Gene ID: k141_28344_177
Type: pfam
Location: 193044 - 194153 (+)
Gene ID: k141_28344_178
Type: pfam
Location: 194238 - 194819 (+)
Gene ID: k141_28344_179
Type: TC
Location: 194831 - 195403 (+)
Gene ID: k141_28344_180
Type:
Location: 195609 - 195938 (+)
Gene ID: k141_28344_181
Type: pfam
Location: 196210 - 197184 (+)
Gene ID: k141_28344_182
Type: CAZyme
Location: 197229 - 198035 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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