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Cluster: CGMR026668_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_258263 k141_258263_1 3 467 - GT2
CAZyme k141_258263 k141_258263_2 470 1300 - GT111
NULL(UNKNOWN) k141_258263 k141_258263_3 1304 2896 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_258263 k141_258263_4 3023 4171 + GT4
CAZyme k141_258263 k141_258263_5 4433 5281 + GT2
pfam k141_258263 k141_258263_6 5551 6636 + Exo_endo_phos
pfam k141_258263 k141_258263_7 6766 7842 + Exo_endo_phos
CAZyme k141_258263 k141_258263_8 7852 9027 + GT2
pfam k141_258263 k141_258263_9 9296 10228 - 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
TC k141_258263 k141_258263_10 10330 11940 - 3.A.1.121.4
Gene ID: k141_258263_1
Type: CAZyme
Location: 3 - 467 (-)
Gene ID: k141_258263_2
Type: CAZyme
Location: 470 - 1300 (-)
Gene ID: k141_258263_3
Type:
Location: 1304 - 2896 (-)
Gene ID: k141_258263_4
Type: CAZyme
Location: 3023 - 4171 (+)
Gene ID: k141_258263_5
Type: CAZyme
Location: 4433 - 5281 (+)
Gene ID: k141_258263_6
Type: pfam
Location: 5551 - 6636 (+)
Gene ID: k141_258263_7
Type: pfam
Location: 6766 - 7842 (+)
Gene ID: k141_258263_8
Type: CAZyme
Location: 7852 - 9027 (+)
Gene ID: k141_258263_9
Type: pfam
Location: 9296 - 10228 (-)
Gene ID: k141_258263_10
Type: TC
Location: 10330 - 11940 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_258263_10 vegan > omnivore 1.00798 0.02695

🧭 Explore Read Mapping of CGC

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