dbCAN Logo

Cluster: CGMR026533_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_19771 k141_19771_23 22767 24827 + GH42
TC k141_19771 k141_19771_24 24852 26774 + 2.A.2.2.2
TF k141_19771 k141_19771_25 26839 27897 - LacI
STP k141_19771 k141_19771_26 28068 29147 + SIS
TC k141_19771 k141_19771_27 29165 30217 + 4.A.1.2.2
TC k141_19771 k141_19771_28 30425 31015 + 4.A.1.1.13
peptidase k141_19771 k141_19771_29 31072 32478 - C69.001
TC k141_19771 k141_19771_30 32695 33435 + 3.A.1.15.8
TC k141_19771 k141_19771_31 33432 34286 + 3.A.1.15.14
TC k141_19771 k141_19771_32 34289 35233 + 3.A.1.15.14
TF k141_19771 k141_19771_33 35350 35814 + MarR
TC k141_19771 k141_19771_34 35925 37322 + 2.A.1.3.26
TF k141_19771 k141_19771_35 37423 38160 + HTH_6
TC k141_19771 k141_19771_36 38305 39621 + 4.A.3.2.7
CAZyme k141_19771 k141_19771_37 39642 41072 + GH1
pfam k141_19771 k141_19771_38 41086 41982 + ROK
NULL(UNKNOWN) k141_19771 k141_19771_39 42216 42455 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_19771 k141_19771_40 42484 43899 + 2.A.2.2.3
pfam k141_19771 k141_19771_41 44432 45445 + LytR_cpsA_psr
TC k141_19771 k141_19771_42 45450 46961 - 3.A.1.121.3
TC k141_19771 k141_19771_43 47827 49218 + 2.A.3.3.22
TC k141_19771 k141_19771_44 49286 50374 + 9.B.141.1.3
TC k141_19771 k141_19771_45 50371 51117 + 9.B.141.1.1
Gene ID: k141_19771_23
Type: CAZyme
Location: 22767 - 24827 (+)
Gene ID: k141_19771_24
Type: TC
Location: 24852 - 26774 (+)
Gene ID: k141_19771_25
Type: TF
Location: 26839 - 27897 (-)
Gene ID: k141_19771_26
Type: STP
Location: 28068 - 29147 (+)
Gene ID: k141_19771_27
Type: TC
Location: 29165 - 30217 (+)
Gene ID: k141_19771_28
Type: TC
Location: 30425 - 31015 (+)
Gene ID: k141_19771_29
Type: peptidase
Location: 31072 - 32478 (-)
Gene ID: k141_19771_30
Type: TC
Location: 32695 - 33435 (+)
Gene ID: k141_19771_31
Type: TC
Location: 33432 - 34286 (+)
Gene ID: k141_19771_32
Type: TC
Location: 34289 - 35233 (+)
Gene ID: k141_19771_33
Type: TF
Location: 35350 - 35814 (+)
Gene ID: k141_19771_34
Type: TC
Location: 35925 - 37322 (+)
Gene ID: k141_19771_35
Type: TF
Location: 37423 - 38160 (+)
Gene ID: k141_19771_36
Type: TC
Location: 38305 - 39621 (+)
Gene ID: k141_19771_37
Type: CAZyme
Location: 39642 - 41072 (+)
Gene ID: k141_19771_38
Type: pfam
Location: 41086 - 41982 (+)
Gene ID: k141_19771_39
Type:
Location: 42216 - 42455 (+)
Gene ID: k141_19771_40
Type: TC
Location: 42484 - 43899 (+)
Gene ID: k141_19771_41
Type: pfam
Location: 44432 - 45445 (+)
Gene ID: k141_19771_42
Type: TC
Location: 45450 - 46961 (-)
Gene ID: k141_19771_43
Type: TC
Location: 47827 - 49218 (+)
Gene ID: k141_19771_44
Type: TC
Location: 49286 - 50374 (+)
Gene ID: k141_19771_45
Type: TC
Location: 50371 - 51117 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List