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Cluster: CGMR026533_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_126151 k141_126151_55 55820 56878 - GT4
pfam k141_126151 k141_126151_56 57091 57699 + VanZ
TC k141_126151 k141_126151_57 57988 58854 + 2.A.7.5.5
TC k141_126151 k141_126151_58 59021 61567 + 9.B.144.1.5
NULL(UNKNOWN) k141_126151 k141_126151_59 61672 62109 + NULL(UNKNOWN)
[View Structural Homologs]
TF k141_126151 k141_126151_60 62173 62886 - GntR
TC k141_126151 k141_126151_61 63059 64537 + 4.A.1.2.2
CAZyme k141_126151 k141_126151_62 64551 66200 + GH13_29
TC k141_126151 k141_126151_63 66217 66705 + 4.A.1.1.12
pfam k141_126151 k141_126151_64 66714 67514 + YdjC
pfam k141_126151 k141_126151_65 67511 68119 + Lipase_GDSL | Lipase_GDSL_2
TC k141_126151 k141_126151_66 68176 68883 - 2.A.89.3.2
TC k141_126151 k141_126151_67 68943 69623 - 2.A.89.3.2
Gene ID: k141_126151_55
Type: CAZyme
Location: 55820 - 56878 (-)
Gene ID: k141_126151_56
Type: pfam
Location: 57091 - 57699 (+)
Gene ID: k141_126151_57
Type: TC
Location: 57988 - 58854 (+)
Gene ID: k141_126151_58
Type: TC
Location: 59021 - 61567 (+)
Gene ID: k141_126151_59
Type:
Location: 61672 - 62109 (+)
Gene ID: k141_126151_60
Type: TF
Location: 62173 - 62886 (-)
Gene ID: k141_126151_61
Type: TC
Location: 63059 - 64537 (+)
Gene ID: k141_126151_62
Type: CAZyme
Location: 64551 - 66200 (+)
Gene ID: k141_126151_63
Type: TC
Location: 66217 - 66705 (+)
Gene ID: k141_126151_64
Type: pfam
Location: 66714 - 67514 (+)
Gene ID: k141_126151_65
Type: pfam
Location: 67511 - 68119 (+)
Gene ID: k141_126151_66
Type: TC
Location: 68176 - 68883 (-)
Gene ID: k141_126151_67
Type: TC
Location: 68943 - 69623 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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