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Cluster: CGMR026533_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_174634 k141_174634_63 65286 66224 + 9.B.126.2.5
pfam k141_174634 k141_174634_64 66359 67330 + LytR_cpsA_psr
TC k141_174634 k141_174634_65 67354 68157 + 8.A.3.2.4
TC k141_174634 k141_174634_66 68164 68910 + 8.A.3.2.1
TC k141_174634 k141_174634_67 68932 69627 + 9.B.18.1.2
CAZyme k141_174634 k141_174634_68 69650 70429 + GT111
CAZyme k141_174634 k141_174634_69 70429 71466 + GT4
CAZyme k141_174634 k141_174634_70 71483 72451 + GT2
pfam k141_174634 k141_174634_71 72451 73437 + Stealth_CR2 | Stealth_CR1
CAZyme k141_174634 k141_174634_72 73457 74347 + GT2
pfam k141_174634 k141_174634_73 74344 75477 + EpsG
STP k141_174634 k141_174634_74 75495 76607 + Pyr_redox
TC k141_174634 k141_174634_75 76611 78020 + 2.A.66.2.16
Gene ID: k141_174634_63
Type: TC
Location: 65286 - 66224 (+)
Gene ID: k141_174634_64
Type: pfam
Location: 66359 - 67330 (+)
Gene ID: k141_174634_65
Type: TC
Location: 67354 - 68157 (+)
Gene ID: k141_174634_66
Type: TC
Location: 68164 - 68910 (+)
Gene ID: k141_174634_67
Type: TC
Location: 68932 - 69627 (+)
Gene ID: k141_174634_68
Type: CAZyme
Location: 69650 - 70429 (+)
Gene ID: k141_174634_69
Type: CAZyme
Location: 70429 - 71466 (+)
Gene ID: k141_174634_70
Type: CAZyme
Location: 71483 - 72451 (+)
Gene ID: k141_174634_71
Type: pfam
Location: 72451 - 73437 (+)
Gene ID: k141_174634_72
Type: CAZyme
Location: 73457 - 74347 (+)
Gene ID: k141_174634_73
Type: pfam
Location: 74344 - 75477 (+)
Gene ID: k141_174634_74
Type: STP
Location: 75495 - 76607 (+)
Gene ID: k141_174634_75
Type: TC
Location: 76611 - 78020 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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