Cluster: CGMR026533_CGC11
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR026533
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_146780 | k141_146780_26 | 25372 | 27300 | - | 9.B.97.5.1 |
| pfam | k141_146780 | k141_146780_27 | 27439 | 28731 | - | GTP1_OBG | MMR_HSR1 | FeoB_N | DUF1967 |
| CAZyme | k141_146780 | k141_146780_28 | 28890 | 29984 | - | GH170 |
| TF | k141_146780 | k141_146780_29 | 30184 | 30936 | + | HTH_DeoR |
| STP | k141_146780 | k141_146780_30 | 30936 | 31853 | + | PfkB |
| TC | k141_146780 | k141_146780_31 | 31878 | 33812 | + | 4.A.2.1.7 |
| pfam | k141_146780 | k141_146780_32 | 33874 | 36399 | - | AAA_21 | UvrA_DNA-bind |
| TC | k141_146780 | k141_146780_33 | 36454 | 37293 | - | 2.A.115.1.2 |
Gene ID: k141_146780_26
Type: TC
Location: 25372 - 27300 (-)
Type: TC
Location: 25372 - 27300 (-)
Gene ID: k141_146780_27
Type: pfam
Location: 27439 - 28731 (-)
Type: pfam
Location: 27439 - 28731 (-)
Gene ID: k141_146780_28
Type: CAZyme
Location: 28890 - 29984 (-)
Type: CAZyme
Location: 28890 - 29984 (-)
Gene ID: k141_146780_29
Type: TF
Location: 30184 - 30936 (+)
Type: TF
Location: 30184 - 30936 (+)
Gene ID: k141_146780_30
Type: STP
Location: 30936 - 31853 (+)
Type: STP
Location: 30936 - 31853 (+)
Gene ID: k141_146780_31
Type: TC
Location: 31878 - 33812 (+)
Type: TC
Location: 31878 - 33812 (+)
Gene ID: k141_146780_32
Type: pfam
Location: 33874 - 36399 (-)
Type: pfam
Location: 33874 - 36399 (-)
Gene ID: k141_146780_33
Type: TC
Location: 36454 - 37293 (-)
Type: TC
Location: 36454 - 37293 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Latilactobacillus
Species
Latilactobacillus sakei
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.