Cluster: CGMR026495_CGC4
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR026495
- CGC Family ID: CGCFAM_08418
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_151610 | k141_151610_3 | 628 | 1761 | + | GT28 |
| CAZyme | k141_151610 | k141_151610_4 | 1748 | 2446 | + | CE4 |
| TC | k141_151610 | k141_151610_5 | 2443 | 3492 | + | 4.D.2.1.5 |
| STP | k141_151610 | k141_151610_6 | 3600 | 4091 | + | Sigma70_r2 | Sigma70_r4_2 |
| pfam | k141_151610 | k141_151610_7 | 4081 | 4797 | + | zf-HC2 |
| TC | k141_151610 | k141_151610_8 | 5172 | 6965 | + | 3.A.1.21.1 |
| TC | k141_151610 | k141_151610_9 | 6962 | 8704 | + | 3.A.1.21.1 |
| pfam | k141_151610 | k141_151610_10 | 8775 | 9377 | + | Trep_Strep |
| pfam | k141_151610 | k141_151610_11 | 9374 | 10072 | + | CbiQ |
| TC | k141_151610 | k141_151610_12 | 10069 | 11472 | + | 3.A.1.31.2 |
Gene ID: k141_151610_3
Type: CAZyme
Location: 628 - 1761 (+)
Type: CAZyme
Location: 628 - 1761 (+)
Gene ID: k141_151610_4
Type: CAZyme
Location: 1748 - 2446 (+)
Type: CAZyme
Location: 1748 - 2446 (+)
Gene ID: k141_151610_5
Type: TC
Location: 2443 - 3492 (+)
Type: TC
Location: 2443 - 3492 (+)
Gene ID: k141_151610_6
Type: STP
Location: 3600 - 4091 (+)
Type: STP
Location: 3600 - 4091 (+)
Gene ID: k141_151610_7
Type: pfam
Location: 4081 - 4797 (+)
Type: pfam
Location: 4081 - 4797 (+)
Gene ID: k141_151610_8
Type: TC
Location: 5172 - 6965 (+)
Type: TC
Location: 5172 - 6965 (+)
Gene ID: k141_151610_9
Type: TC
Location: 6962 - 8704 (+)
Type: TC
Location: 6962 - 8704 (+)
Gene ID: k141_151610_10
Type: pfam
Location: 8775 - 9377 (+)
Type: pfam
Location: 8775 - 9377 (+)
Gene ID: k141_151610_11
Type: pfam
Location: 9374 - 10072 (+)
Type: pfam
Location: 9374 - 10072 (+)
Gene ID: k141_151610_12
Type: TC
Location: 10069 - 11472 (+)
Type: TC
Location: 10069 - 11472 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Peptostreptococcales
Family
Anaerovoracaceae
Genus
CAG-238
Species
CAG-238 sp900542245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_151610_3 | vegetarian > omnivore | 1.63830 | 0.04981 |
| k141_151610_3 | vegetarian > vegan | 1.88583 | 0.00433 |
| k141_151610_4 | vegetarian > omnivore | 2.04181 | 0.04981 |
| k141_151610_4 | vegetarian > vegan | 2.03392 | 0.00433 |
| k141_151610_5 | vegetarian > omnivore | 1.81483 | 0.04981 |
| k141_151610_5 | vegetarian > vegan | 2.04423 | 0.00433 |
| k141_151610_6 | vegetarian > omnivore | 1.59655 | 0.04981 |
| k141_151610_6 | vegetarian > vegan | 1.83493 | 0.00433 |
| k141_151610_7 | vegetarian > omnivore | 1.11854 | 0.04981 |
| k141_151610_7 | vegetarian > vegan | 2.41129 | 0.00433 |