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Cluster: CGMR026306_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_71474 k141_71474_88 113757 114890 - GT19
pfam k141_71474 k141_71474_89 114906 115673 - SurE
TC k141_71474 k141_71474_90 115867 118668 - 1.C.105.2.12
TF k141_71474 k141_71474_91 118822 119376 + GerE
STP k141_71474 k141_71474_92 119451 120485 + FecR
CAZyme k141_71474 k141_71474_93 120512 121399 + CE14
TC k141_71474 k141_71474_94 121650 125030 + 1.B.14.6.2
TC k141_71474 k141_71474_95 125044 126633 + 8.A.46.2.1
CAZyme k141_71474 k141_71474_96 126664 127461 + GH16_3
CAZyme k141_71474 k141_71474_97 127468 129069 + GH16_3
STP k141_71474 k141_71474_98 129102 129650 - Sigma70_r2 | Sigma70_r4_2
STP k141_71474 k141_71474_99 129827 130888 + FecR
TC k141_71474 k141_71474_100 131069 134332 + 1.B.14.6.1
Gene ID: k141_71474_88
Type: CAZyme
Location: 113757 - 114890 (-)
Gene ID: k141_71474_89
Type: pfam
Location: 114906 - 115673 (-)
Gene ID: k141_71474_90
Type: TC
Location: 115867 - 118668 (-)
Gene ID: k141_71474_91
Type: TF
Location: 118822 - 119376 (+)
Gene ID: k141_71474_92
Type: STP
Location: 119451 - 120485 (+)
Gene ID: k141_71474_93
Type: CAZyme
Location: 120512 - 121399 (+)
Gene ID: k141_71474_94
Type: TC
Location: 121650 - 125030 (+)
Gene ID: k141_71474_95
Type: TC
Location: 125044 - 126633 (+)
Gene ID: k141_71474_96
Type: CAZyme
Location: 126664 - 127461 (+)
Gene ID: k141_71474_97
Type: CAZyme
Location: 127468 - 129069 (+)
Gene ID: k141_71474_98
Type: STP
Location: 129102 - 129650 (-)
Gene ID: k141_71474_99
Type: STP
Location: 129827 - 130888 (+)
Gene ID: k141_71474_100
Type: TC
Location: 131069 - 134332 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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