Cluster: CGMR026306_CGC18
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR026306
- CGC Family ID: CGCFAM_02996
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_71474 | k141_71474_43 | 66177 | 67751 | + | GH23 |
| STP | k141_71474 | k141_71474_44 | 67844 | 70129 | + | HD |
| TC | k141_71474 | k141_71474_45 | 70203 | 71150 | - | 2.A.19.5.2 |
| pfam | k141_71474 | k141_71474_46 | 71160 | 71555 | - | DUF3127 |
| TF | k141_71474 | k141_71474_47 | 71608 | 72000 | - | MerR |
| TC | k141_71474 | k141_71474_48 | 72015 | 72998 | - | 1.A.34.1.3 |
Gene ID: k141_71474_43
Type: CAZyme
Location: 66177 - 67751 (+)
Type: CAZyme
Location: 66177 - 67751 (+)
Gene ID: k141_71474_44
Type: STP
Location: 67844 - 70129 (+)
Type: STP
Location: 67844 - 70129 (+)
Gene ID: k141_71474_45
Type: TC
Location: 70203 - 71150 (-)
Type: TC
Location: 70203 - 71150 (-)
Gene ID: k141_71474_46
Type: pfam
Location: 71160 - 71555 (-)
Type: pfam
Location: 71160 - 71555 (-)
Gene ID: k141_71474_47
Type: TF
Location: 71608 - 72000 (-)
Type: TF
Location: 71608 - 72000 (-)
Gene ID: k141_71474_48
Type: TC
Location: 72015 - 72998 (-)
Type: TC
Location: 72015 - 72998 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides chinchillae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.