Cluster: CGMR026068_CGC6
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR026068
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_226124 | k141_226124_15 | 11803 | 14019 | + | 1.A.23.3.2 |
| peptidase | k141_226124 | k141_226124_16 | 14065 | 14868 | - | S09.UNW |
| TC | k141_226124 | k141_226124_17 | 14979 | 17228 | + | 1.B.14.1.5 |
| peptidase | k141_226124 | k141_226124_18 | 17272 | 18090 | - | S09.UNW |
| TC | k141_226124 | k141_226124_19 | 18071 | 18877 | - | 3.A.1.14.20 |
| TC | k141_226124 | k141_226124_20 | 18874 | 19950 | - | 3.A.1.14.21 |
| STP | k141_226124 | k141_226124_21 | 19950 | 21050 | - | Peripla_BP_2 |
| pfam | k141_226124 | k141_226124_22 | 21065 | 21826 | - | adh_short | Epimerase | KR | adh_short_C2 |
| TC | k141_226124 | k141_226124_23 | 21817 | 25671 | - | 2.A.1.42.2 |
| pfam | k141_226124 | k141_226124_24 | 25674 | 25922 | - | PP-binding |
| pfam | k141_226124 | k141_226124_25 | 25924 | 26556 | - | Isochorismatase |
| TC | k141_226124 | k141_226124_26 | 26556 | 28187 | - | 4.C.1.1.4 |
| peptidase | k141_226124 | k141_226124_27 | 28180 | 29349 | - | C26.UPW |
| TC | k141_226124 | k141_226124_28 | 29346 | 30590 | - | 2.A.1.2.4 |
| NULL(UNKNOWN) | k141_226124 | k141_226124_29 | 30781 | 31920 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_226124 | k141_226124_30 | 31922 | 32587 | + | ACPS | 4PPT_N |
| CAZyme | k141_226124 | k141_226124_31 | 32576 | 34732 | - | AA2 | AA2 |
Gene ID: k141_226124_15
Type: TC
Location: 11803 - 14019 (+)
Type: TC
Location: 11803 - 14019 (+)
Gene ID: k141_226124_16
Type: peptidase
Location: 14065 - 14868 (-)
Type: peptidase
Location: 14065 - 14868 (-)
Gene ID: k141_226124_17
Type: TC
Location: 14979 - 17228 (+)
Type: TC
Location: 14979 - 17228 (+)
Gene ID: k141_226124_18
Type: peptidase
Location: 17272 - 18090 (-)
Type: peptidase
Location: 17272 - 18090 (-)
Gene ID: k141_226124_19
Type: TC
Location: 18071 - 18877 (-)
Type: TC
Location: 18071 - 18877 (-)
Gene ID: k141_226124_20
Type: TC
Location: 18874 - 19950 (-)
Type: TC
Location: 18874 - 19950 (-)
Gene ID: k141_226124_21
Type: STP
Location: 19950 - 21050 (-)
Type: STP
Location: 19950 - 21050 (-)
Gene ID: k141_226124_22
Type: pfam
Location: 21065 - 21826 (-)
Type: pfam
Location: 21065 - 21826 (-)
Gene ID: k141_226124_23
Type: TC
Location: 21817 - 25671 (-)
Type: TC
Location: 21817 - 25671 (-)
Gene ID: k141_226124_24
Type: pfam
Location: 25674 - 25922 (-)
Type: pfam
Location: 25674 - 25922 (-)
Gene ID: k141_226124_25
Type: pfam
Location: 25924 - 26556 (-)
Type: pfam
Location: 25924 - 26556 (-)
Gene ID: k141_226124_26
Type: TC
Location: 26556 - 28187 (-)
Type: TC
Location: 26556 - 28187 (-)
Gene ID: k141_226124_27
Type: peptidase
Location: 28180 - 29349 (-)
Type: peptidase
Location: 28180 - 29349 (-)
Gene ID: k141_226124_28
Type: TC
Location: 29346 - 30590 (-)
Type: TC
Location: 29346 - 30590 (-)
Gene ID: k141_226124_29
Type:
Location: 30781 - 31920 (+)
Type:
Location: 30781 - 31920 (+)
Gene ID: k141_226124_30
Type: pfam
Location: 31922 - 32587 (+)
Type: pfam
Location: 31922 - 32587 (+)
Gene ID: k141_226124_31
Type: CAZyme
Location: 32576 - 34732 (-)
Type: CAZyme
Location: 32576 - 34732 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Aeromonadaceae
Genus
Oceanimonas
Species
Oceanimonas smirnovii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.