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Cluster: CGMR026068_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_108093 k141_108093_42 47985 49478 - 4.A.1.1.2
pfam k141_108093 k141_108093_43 49578 50372 + Glucosamine_iso
CAZyme k141_108093 k141_108093_44 50376 51518 + CE9
TF k141_108093 k141_108093_45 51515 52729 + MarR
pfam k141_108093 k141_108093_46 52726 53040 + SUI1
TC k141_108093 k141_108093_47 53278 53841 + 2.A.106.1.4
TC k141_108093 k141_108093_48 53876 55321 - 2.A.62.1.2
pfam k141_108093 k141_108093_49 55601 56929 + Acetyltransf_1 | AA_kinase | Acetyltransf_7
STP k141_108093 k141_108093_50 57244 58581 + ACT
TC k141_108093 k141_108093_51 58737 60020 - 9.B.20.3.3
TC k141_108093 k141_108093_52 60035 61159 - 3.D.2.3.1
TF k141_108093 k141_108093_53 61319 61867 + HTH_3
TF k141_108093 k141_108093_54 61868 62410 - HTH_3
TC k141_108093 k141_108093_55 62421 63266 - 3.A.1.11.2
TC k141_108093 k141_108093_56 63270 64160 - 3.A.1.11.2
TC k141_108093 k141_108093_57 64173 65294 - 3.A.1.11.2
TC k141_108093 k141_108093_58 65486 66592 - 3.A.1.11.2
Gene ID: k141_108093_42
Type: TC
Location: 47985 - 49478 (-)
Gene ID: k141_108093_43
Type: pfam
Location: 49578 - 50372 (+)
Gene ID: k141_108093_44
Type: CAZyme
Location: 50376 - 51518 (+)
Gene ID: k141_108093_45
Type: TF
Location: 51515 - 52729 (+)
Gene ID: k141_108093_46
Type: pfam
Location: 52726 - 53040 (+)
Gene ID: k141_108093_47
Type: TC
Location: 53278 - 53841 (+)
Gene ID: k141_108093_48
Type: TC
Location: 53876 - 55321 (-)
Gene ID: k141_108093_49
Type: pfam
Location: 55601 - 56929 (+)
Gene ID: k141_108093_50
Type: STP
Location: 57244 - 58581 (+)
Gene ID: k141_108093_51
Type: TC
Location: 58737 - 60020 (-)
Gene ID: k141_108093_52
Type: TC
Location: 60035 - 61159 (-)
Gene ID: k141_108093_53
Type: TF
Location: 61319 - 61867 (+)
Gene ID: k141_108093_54
Type: TF
Location: 61868 - 62410 (-)
Gene ID: k141_108093_55
Type: TC
Location: 62421 - 63266 (-)
Gene ID: k141_108093_56
Type: TC
Location: 63270 - 64160 (-)
Gene ID: k141_108093_57
Type: TC
Location: 64173 - 65294 (-)
Gene ID: k141_108093_58
Type: TC
Location: 65486 - 66592 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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