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Cluster: CGMR026044_CGC55

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_54203 k141_54203_7 6370 7743 + 9.B.18.1.1
pfam k141_54203 k141_54203_8 7817 9229 + UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
pfam k141_54203 k141_54203_9 9260 9703 + LMWPc
TC k141_54203 k141_54203_10 9697 10875 + 1.B.18.3.1
TC k141_54203 k141_54203_11 10926 13151 + 8.A.3.3.3
CAZyme k141_54203 k141_54203_12 13216 14175 + GT2
CAZyme k141_54203 k141_54203_13 14219 15358 + GT4
NULL(UNKNOWN) k141_54203 k141_54203_14 15369 16238 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_54203 k141_54203_15 16266 16835 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_54203 k141_54203_16 16832 18016 + GT4
CAZyme k141_54203 k141_54203_17 18016 19182 + GT4
Gene ID: k141_54203_7
Type: TC
Location: 6370 - 7743 (+)
Gene ID: k141_54203_8
Type: pfam
Location: 7817 - 9229 (+)
Gene ID: k141_54203_9
Type: pfam
Location: 9260 - 9703 (+)
Gene ID: k141_54203_10
Type: TC
Location: 9697 - 10875 (+)
Gene ID: k141_54203_11
Type: TC
Location: 10926 - 13151 (+)
Gene ID: k141_54203_12
Type: CAZyme
Location: 13216 - 14175 (+)
Gene ID: k141_54203_13
Type: CAZyme
Location: 14219 - 15358 (+)
Gene ID: k141_54203_14
Type:
Location: 15369 - 16238 (+)
Gene ID: k141_54203_15
Type:
Location: 16266 - 16835 (+)
Gene ID: k141_54203_16
Type: CAZyme
Location: 16832 - 18016 (+)
Gene ID: k141_54203_17
Type: CAZyme
Location: 18016 - 19182 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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