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Cluster: CGMR026044_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_30201 k141_30201_8 13911 15116 - 9.A.41.1.3
TC k141_30201 k141_30201_9 15547 16698 + 8.A.4.2.1
TC k141_30201 k141_30201_10 16711 17502 + 3.A.1.101.3
TC k141_30201 k141_30201_11 17499 18155 + 3.A.1.101.3
CAZyme k141_30201 k141_30201_12 18442 19476 + GT4
pfam k141_30201 k141_30201_13 19498 21453 - GSCFA | WcbI
pfam k141_30201 k141_30201_14 21541 22440 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd
CAZyme k141_30201 k141_30201_15 22464 25484 - GT4 | GT4
CAZyme k141_30201 k141_30201_16 25546 26667 - GT4
pfam k141_30201 k141_30201_17 26774 27811 - Epimerase | RmlD_sub_bind | GDP_Man_Dehyd
TC k141_30201 k141_30201_18 28023 29039 - 1.B.18.2.4
Gene ID: k141_30201_8
Type: TC
Location: 13911 - 15116 (-)
Gene ID: k141_30201_9
Type: TC
Location: 15547 - 16698 (+)
Gene ID: k141_30201_10
Type: TC
Location: 16711 - 17502 (+)
Gene ID: k141_30201_11
Type: TC
Location: 17499 - 18155 (+)
Gene ID: k141_30201_12
Type: CAZyme
Location: 18442 - 19476 (+)
Gene ID: k141_30201_13
Type: pfam
Location: 19498 - 21453 (-)
Gene ID: k141_30201_14
Type: pfam
Location: 21541 - 22440 (-)
Gene ID: k141_30201_15
Type: CAZyme
Location: 22464 - 25484 (-)
Gene ID: k141_30201_16
Type: CAZyme
Location: 25546 - 26667 (-)
Gene ID: k141_30201_17
Type: pfam
Location: 26774 - 27811 (-)
Gene ID: k141_30201_18
Type: TC
Location: 28023 - 29039 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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