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Cluster: CGMR026044_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_156878 k141_156878_1 95 1042 - 3.A.1.12.12
TF k141_156878 k141_156878_2 1141 2139 - HTH_AraC
TC k141_156878 k141_156878_3 2248 3144 - 3.A.1.12.5
TC k141_156878 k141_156878_4 3137 4306 - 3.A.1.12.1
pfam k141_156878 k141_156878_5 4912 8325 + DUF2339 | DUF2339 | DUF2339
pfam k141_156878 k141_156878_6 8322 9665 + DUF3999
CAZyme k141_156878 k141_156878_7 9795 10448 + GH23
TF k141_156878 k141_156878_8 10457 11155 - Trans_reg_C
TC k141_156878 k141_156878_9 11196 12251 - 3.A.3.7.1
Gene ID: k141_156878_1
Type: TC
Location: 95 - 1042 (-)
Gene ID: k141_156878_2
Type: TF
Location: 1141 - 2139 (-)
Gene ID: k141_156878_3
Type: TC
Location: 2248 - 3144 (-)
Gene ID: k141_156878_4
Type: TC
Location: 3137 - 4306 (-)
Gene ID: k141_156878_5
Type: pfam
Location: 4912 - 8325 (+)
Gene ID: k141_156878_6
Type: pfam
Location: 8322 - 9665 (+)
Gene ID: k141_156878_7
Type: CAZyme
Location: 9795 - 10448 (+)
Gene ID: k141_156878_8
Type: TF
Location: 10457 - 11155 (-)
Gene ID: k141_156878_9
Type: TC
Location: 11196 - 12251 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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