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Cluster: CGMR026042_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_18207 k141_18207_13 13746 15116 + 2.A.11.1.2
pfam k141_18207 k141_18207_14 15363 17213 + Gly_radical | NRDD
pfam k141_18207 k141_18207_15 17210 17746 + Radical_SAM | Fer4_12
TC k141_18207 k141_18207_16 18264 19886 + 2.A.15.2.3
TF k141_18207 k141_18207_17 20056 20619 - 0040266
sulfatase k141_18207 k141_18207_18 20872 22362 + S1_6
CAZyme k141_18207 k141_18207_19 22623 24332 + AA3_2
pfam k141_18207 k141_18207_20 24610 24822 + YozE_SAM_like
pfam k141_18207 k141_18207_21 25102 25545 + ABM
TC k141_18207 k141_18207_22 25718 27337 + 4.C.1.1.4
Gene ID: k141_18207_13
Type: TC
Location: 13746 - 15116 (+)
Gene ID: k141_18207_14
Type: pfam
Location: 15363 - 17213 (+)
Gene ID: k141_18207_15
Type: pfam
Location: 17210 - 17746 (+)
Gene ID: k141_18207_16
Type: TC
Location: 18264 - 19886 (+)
Gene ID: k141_18207_17
Type: TF
Location: 20056 - 20619 (-)
Gene ID: k141_18207_18
Type: sulfatase
Location: 20872 - 22362 (+)
Gene ID: k141_18207_19
Type: CAZyme
Location: 22623 - 24332 (+)
Gene ID: k141_18207_20
Type: pfam
Location: 24610 - 24822 (+)
Gene ID: k141_18207_21
Type: pfam
Location: 25102 - 25545 (+)
Gene ID: k141_18207_22
Type: TC
Location: 25718 - 27337 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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