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Cluster: CGMR026042_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_42495 k141_42495_69 60442 62844 + 2.A.63.1.4
TC k141_42495 k141_42495_70 62831 63256 + 2.A.63.1.2
TC k141_42495 k141_42495_71 63253 63597 + 2.A.63.1.2
TC k141_42495 k141_42495_72 63587 65083 + 2.A.63.1.3
TC k141_42495 k141_42495_73 65084 65566 + 2.A.63.1.2
pfam k141_42495 k141_42495_74 65563 65865 + MrpF_PhaF
TC k141_42495 k141_42495_75 65840 66277 + 2.A.63.1.4
TC k141_42495 k141_42495_76 66617 68659 + 2.A.36.3.2
TC k141_42495 k141_42495_77 69686 70615 - 3.A.1.15.15
TC k141_42495 k141_42495_78 70612 71448 - 3.A.1.15.15
TC k141_42495 k141_42495_79 71442 72185 - 3.A.1.15.15
TF k141_42495 k141_42495_80 72307 72951 + Fe_dep_repress
pfam k141_42495 k141_42495_81 73031 73783 - Peptidase_M50B
CAZyme k141_42495 k141_42495_82 74019 74783 + GT26
TC k141_42495 k141_42495_83 74844 75638 - 3.A.1.104.2
TC k141_42495 k141_42495_84 75985 76797 + 3.A.1.104.2
pfam k141_42495 k141_42495_85 76896 77999 + Glyphos_transf
CAZyme k141_42495 k141_42495_86 77996 79057 + GT2
pfam k141_42495 k141_42495_87 79120 79518 + CTP_transf_like
peptidase k141_42495 k141_42495_88 79635 80930 - S11.010
TC k141_42495 k141_42495_89 81351 83078 + 3.A.1.123.2
TC k141_42495 k141_42495_90 83435 84664 + 2.A.41.1.3
TC k141_42495 k141_42495_91 85189 86022 + 2.A.115.1.2
TC k141_42495 k141_42495_92 86304 87101 + 3.A.1.14.7
TC k141_42495 k141_42495_93 87137 88141 + 3.A.1.14.7
TC k141_42495 k141_42495_94 88138 89154 + 3.A.1.14.15
Gene ID: k141_42495_69
Type: TC
Location: 60442 - 62844 (+)
Gene ID: k141_42495_70
Type: TC
Location: 62831 - 63256 (+)
Gene ID: k141_42495_71
Type: TC
Location: 63253 - 63597 (+)
Gene ID: k141_42495_72
Type: TC
Location: 63587 - 65083 (+)
Gene ID: k141_42495_73
Type: TC
Location: 65084 - 65566 (+)
Gene ID: k141_42495_74
Type: pfam
Location: 65563 - 65865 (+)
Gene ID: k141_42495_75
Type: TC
Location: 65840 - 66277 (+)
Gene ID: k141_42495_76
Type: TC
Location: 66617 - 68659 (+)
Gene ID: k141_42495_77
Type: TC
Location: 69686 - 70615 (-)
Gene ID: k141_42495_78
Type: TC
Location: 70612 - 71448 (-)
Gene ID: k141_42495_79
Type: TC
Location: 71442 - 72185 (-)
Gene ID: k141_42495_80
Type: TF
Location: 72307 - 72951 (+)
Gene ID: k141_42495_81
Type: pfam
Location: 73031 - 73783 (-)
Gene ID: k141_42495_82
Type: CAZyme
Location: 74019 - 74783 (+)
Gene ID: k141_42495_83
Type: TC
Location: 74844 - 75638 (-)
Gene ID: k141_42495_84
Type: TC
Location: 75985 - 76797 (+)
Gene ID: k141_42495_85
Type: pfam
Location: 76896 - 77999 (+)
Gene ID: k141_42495_86
Type: CAZyme
Location: 77996 - 79057 (+)
Gene ID: k141_42495_87
Type: pfam
Location: 79120 - 79518 (+)
Gene ID: k141_42495_88
Type: peptidase
Location: 79635 - 80930 (-)
Gene ID: k141_42495_89
Type: TC
Location: 81351 - 83078 (+)
Gene ID: k141_42495_90
Type: TC
Location: 83435 - 84664 (+)
Gene ID: k141_42495_91
Type: TC
Location: 85189 - 86022 (+)
Gene ID: k141_42495_92
Type: TC
Location: 86304 - 87101 (+)
Gene ID: k141_42495_93
Type: TC
Location: 87137 - 88141 (+)
Gene ID: k141_42495_94
Type: TC
Location: 88138 - 89154 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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