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Cluster: CGMR026042_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_1938 k141_1938_5 3240 3863 + 9.B.46.1.1
pfam k141_1938 k141_1938_6 3860 4000 + AgrD
TC k141_1938 k141_1938_7 4025 5317 + 9.B.14.1.13
TF k141_1938 k141_1938_8 5336 6052 + LytTR
STP k141_1938 k141_1938_9 6421 7380 - PfkB
CAZyme k141_1938 k141_1938_10 7377 8861 - GH32
TF k141_1938 k141_1938_11 9010 9960 - LacI
TC k141_1938 k141_1938_12 10143 11393 - 1.A.11.1.4
TC k141_1938 k141_1938_13 11601 11825 - 9.B.102.1.12
TC k141_1938 k141_1938_14 11885 12964 - 9.B.102.1.2
TF k141_1938 k141_1938_15 13268 13903 - 0045030
TC k141_1938 k141_1938_16 14156 16084 + 3.A.1.121.4
Gene ID: k141_1938_5
Type: TC
Location: 3240 - 3863 (+)
Gene ID: k141_1938_6
Type: pfam
Location: 3860 - 4000 (+)
Gene ID: k141_1938_7
Type: TC
Location: 4025 - 5317 (+)
Gene ID: k141_1938_8
Type: TF
Location: 5336 - 6052 (+)
Gene ID: k141_1938_9
Type: STP
Location: 6421 - 7380 (-)
Gene ID: k141_1938_10
Type: CAZyme
Location: 7377 - 8861 (-)
Gene ID: k141_1938_11
Type: TF
Location: 9010 - 9960 (-)
Gene ID: k141_1938_12
Type: TC
Location: 10143 - 11393 (-)
Gene ID: k141_1938_13
Type: TC
Location: 11601 - 11825 (-)
Gene ID: k141_1938_14
Type: TC
Location: 11885 - 12964 (-)
Gene ID: k141_1938_15
Type: TF
Location: 13268 - 13903 (-)
Gene ID: k141_1938_16
Type: TC
Location: 14156 - 16084 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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