Cluster: CGMR026042_CGC12
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR026042
- CGC Family ID: CGCFAM_00018
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_8576 | k141_8576_104 | 131951 | 132508 | - | 9.B.18.1.2 |
| CAZyme | k141_8576 | k141_8576_105 | 132519 | 133724 | - | GT4 |
| TC | k141_8576 | k141_8576_106 | 133758 | 134996 | - | 2.A.66.2.15 |
| pfam | k141_8576 | k141_8576_107 | 135005 | 135562 | - | Hexapep | Hexapep_2 |
| NULL(UNKNOWN) | k141_8576 | k141_8576_108 | 135559 | 136953 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_8576 | k141_8576_109 | 136946 | 138025 | - | GT4 |
| pfam | k141_8576 | k141_8576_110 | 138028 | 139152 | - | Epimerase_2 |
| pfam | k141_8576 | k141_8576_111 | 139156 | 140265 | - | Epimerase | Polysacc_synt_C |
| TC | k141_8576 | k141_8576_112 | 140278 | 141306 | - | 9.B.18.2.1 |
| TC | k141_8576 | k141_8576_113 | 141296 | 143119 | - | 9.B.18.2.1 |
| pfam | k141_8576 | k141_8576_114 | 143139 | 143903 | - | CpsB_CapC |
| TC | k141_8576 | k141_8576_115 | 144033 | 144593 | - | 8.A.3.2.1 |
| TC | k141_8576 | k141_8576_116 | 144609 | 145277 | - | 8.A.3.2.4 |
Gene ID: k141_8576_104
Type: TC
Location: 131951 - 132508 (-)
Type: TC
Location: 131951 - 132508 (-)
Gene ID: k141_8576_105
Type: CAZyme
Location: 132519 - 133724 (-)
Type: CAZyme
Location: 132519 - 133724 (-)
Gene ID: k141_8576_106
Type: TC
Location: 133758 - 134996 (-)
Type: TC
Location: 133758 - 134996 (-)
Gene ID: k141_8576_107
Type: pfam
Location: 135005 - 135562 (-)
Type: pfam
Location: 135005 - 135562 (-)
Gene ID: k141_8576_108
Type:
Location: 135559 - 136953 (-)
Type:
Location: 135559 - 136953 (-)
Gene ID: k141_8576_109
Type: CAZyme
Location: 136946 - 138025 (-)
Type: CAZyme
Location: 136946 - 138025 (-)
Gene ID: k141_8576_110
Type: pfam
Location: 138028 - 139152 (-)
Type: pfam
Location: 138028 - 139152 (-)
Gene ID: k141_8576_111
Type: pfam
Location: 139156 - 140265 (-)
Type: pfam
Location: 139156 - 140265 (-)
Gene ID: k141_8576_112
Type: TC
Location: 140278 - 141306 (-)
Type: TC
Location: 140278 - 141306 (-)
Gene ID: k141_8576_113
Type: TC
Location: 141296 - 143119 (-)
Type: TC
Location: 141296 - 143119 (-)
Gene ID: k141_8576_114
Type: pfam
Location: 143139 - 143903 (-)
Type: pfam
Location: 143139 - 143903 (-)
Gene ID: k141_8576_115
Type: TC
Location: 144033 - 144593 (-)
Type: TC
Location: 144033 - 144593 (-)
Gene ID: k141_8576_116
Type: TC
Location: 144609 - 145277 (-)
Type: TC
Location: 144609 - 145277 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Staphylococcales
Family
Staphylococcaceae
Genus
Staphylococcus
Species
Staphylococcus aureus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.