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Cluster: CGMR026042_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_8576 k141_8576_48 59050 60018 + 3.A.1.20.1
TC k141_8576 k141_8576_49 60015 61571 + 8.A.59.2.1
TF k141_8576 k141_8576_50 61564 62322 + HTH_AraC | HTH_AraC
TC k141_8576 k141_8576_51 62681 64060 - 2.A.1.4.1
pfam k141_8576 k141_8576_52 64293 64787 + ICMT | PEMT
pfam k141_8576 k141_8576_53 65148 66116 - AP_endonuc_2
CAZyme k141_8576 k141_8576_54 66171 67211 - GH179
CAZyme k141_8576 k141_8576_55 67236 68312 - GH179
TC k141_8576 k141_8576_56 68386 69225 - 3.A.1.1.2
TC k141_8576 k141_8576_57 69227 70495 - 3.A.1.1.2
STP k141_8576 k141_8576_58 70498 71769 - SBP_bac_1
TC k141_8576 k141_8576_59 71782 72879 - 3.A.1.1.26
Gene ID: k141_8576_48
Type: TC
Location: 59050 - 60018 (+)
Gene ID: k141_8576_49
Type: TC
Location: 60015 - 61571 (+)
Gene ID: k141_8576_50
Type: TF
Location: 61564 - 62322 (+)
Gene ID: k141_8576_51
Type: TC
Location: 62681 - 64060 (-)
Gene ID: k141_8576_52
Type: pfam
Location: 64293 - 64787 (+)
Gene ID: k141_8576_53
Type: pfam
Location: 65148 - 66116 (-)
Gene ID: k141_8576_54
Type: CAZyme
Location: 66171 - 67211 (-)
Gene ID: k141_8576_55
Type: CAZyme
Location: 67236 - 68312 (-)
Gene ID: k141_8576_56
Type: TC
Location: 68386 - 69225 (-)
Gene ID: k141_8576_57
Type: TC
Location: 69227 - 70495 (-)
Gene ID: k141_8576_58
Type: STP
Location: 70498 - 71769 (-)
Gene ID: k141_8576_59
Type: TC
Location: 71782 - 72879 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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