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Cluster: CGMR025404_CGC64

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_24929 k141_24929_17 16207 18147 + 3.A.3.6.10
TF k141_24929 k141_24929_18 18159 18581 + FUR
CAZyme k141_24929 k141_24929_19 18615 21221 - GH2
CAZyme k141_24929 k141_24929_20 21235 23943 - GH2
CAZyme k141_24929 k141_24929_21 24098 25528 - GH28
NULL(UNKNOWN) k141_24929 k141_24929_22 25602 25979 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_24929 k141_24929_23 26006 27694 - 8.A.46.1.3
TC k141_24929 k141_24929_24 27707 30862 - 1.B.14.6.1
NULL(UNKNOWN) k141_24929 k141_24929_25 31036 31251 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_24929 k141_24929_26 31407 34058 - CBM67 | GH78
TF k141_24929 k141_24929_27 34270 38358 + HTH_AraC
CAZyme k141_24929 k141_24929_28 39082 41907 + GH3
Gene ID: k141_24929_17
Type: TC
Location: 16207 - 18147 (+)
Gene ID: k141_24929_18
Type: TF
Location: 18159 - 18581 (+)
Gene ID: k141_24929_19
Type: CAZyme
Location: 18615 - 21221 (-)
Gene ID: k141_24929_20
Type: CAZyme
Location: 21235 - 23943 (-)
Gene ID: k141_24929_21
Type: CAZyme
Location: 24098 - 25528 (-)
Gene ID: k141_24929_22
Type:
Location: 25602 - 25979 (-)
Gene ID: k141_24929_23
Type: TC
Location: 26006 - 27694 (-)
Gene ID: k141_24929_24
Type: TC
Location: 27707 - 30862 (-)
Gene ID: k141_24929_25
Type:
Location: 31036 - 31251 (+)
Gene ID: k141_24929_26
Type: CAZyme
Location: 31407 - 34058 (-)
Gene ID: k141_24929_27
Type: TF
Location: 34270 - 38358 (+)
Gene ID: k141_24929_28
Type: CAZyme
Location: 39082 - 41907 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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