Cluster: CGMR025404_CGC62
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR025404
- CGC Family ID: CGCFAM_00676
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_90241 | k141_90241_11 | 9477 | 10595 | - | CE19 |
| pfam | k141_90241 | k141_90241_12 | 10635 | 12764 | - | SusD_RagB | SusD-like_3 |
| TC | k141_90241 | k141_90241_13 | 12800 | 16090 | - | 1.B.14.6.1 |
| CAZyme | k141_90241 | k141_90241_14 | 16437 | 17753 | - | CE7 |
| CAZyme | k141_90241 | k141_90241_15 | 17777 | 19534 | - | CE12 | CE8 |
| STP | k141_90241 | k141_90241_16 | 19682 | 20023 | + | AraC_binding |
| CAZyme | k141_90241 | k141_90241_17 | 20018 | 22129 | - | CE8 | GH105 |
| TC | k141_90241 | k141_90241_18 | 22422 | 23795 | + | 4.A.5.1.2 |
| pfam | k141_90241 | k141_90241_19 | 23824 | 24780 | + | KduI |
| TC | k141_90241 | k141_90241_20 | 24923 | 26470 | + | 2.A.1.14.2 |
| pfam | k141_90241 | k141_90241_21 | 26805 | 28712 | + | Fib_succ_major | Mfa_like_1 |
| pfam | k141_90241 | k141_90241_22 | 29012 | 32431 | - | DEAD | AAA_11 | AAA_11 | AAA_12 | AAA_19 | AAA_30 |
| TC | k141_90241 | k141_90241_23 | 32428 | 33237 | - | 2.A.64.1.1 |
Gene ID: k141_90241_11
Type: CAZyme
Location: 9477 - 10595 (-)
Type: CAZyme
Location: 9477 - 10595 (-)
Gene ID: k141_90241_12
Type: pfam
Location: 10635 - 12764 (-)
Type: pfam
Location: 10635 - 12764 (-)
Gene ID: k141_90241_13
Type: TC
Location: 12800 - 16090 (-)
Type: TC
Location: 12800 - 16090 (-)
Gene ID: k141_90241_14
Type: CAZyme
Location: 16437 - 17753 (-)
Type: CAZyme
Location: 16437 - 17753 (-)
Gene ID: k141_90241_15
Type: CAZyme
Location: 17777 - 19534 (-)
Type: CAZyme
Location: 17777 - 19534 (-)
Gene ID: k141_90241_16
Type: STP
Location: 19682 - 20023 (+)
Type: STP
Location: 19682 - 20023 (+)
Gene ID: k141_90241_17
Type: CAZyme
Location: 20018 - 22129 (-)
Type: CAZyme
Location: 20018 - 22129 (-)
Gene ID: k141_90241_18
Type: TC
Location: 22422 - 23795 (+)
Type: TC
Location: 22422 - 23795 (+)
Gene ID: k141_90241_19
Type: pfam
Location: 23824 - 24780 (+)
Type: pfam
Location: 23824 - 24780 (+)
Gene ID: k141_90241_20
Type: TC
Location: 24923 - 26470 (+)
Type: TC
Location: 24923 - 26470 (+)
Gene ID: k141_90241_21
Type: pfam
Location: 26805 - 28712 (+)
Type: pfam
Location: 26805 - 28712 (+)
Gene ID: k141_90241_22
Type: pfam
Location: 29012 - 32431 (-)
Type: pfam
Location: 29012 - 32431 (-)
Gene ID: k141_90241_23
Type: TC
Location: 32428 - 33237 (-)
Type: TC
Location: 32428 - 33237 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides fluxus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_90241_16 | vegan > omnivore | 3.61857 | 0.04571 |