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Cluster: CGMR025404_CGC58

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_21352 k141_21352_1 63 728 - 3.A.1.122.2
pfam k141_21352 k141_21352_2 768 1478 - ThiF
TC k141_21352 k141_21352_3 1516 3645 - 2.A.37.2.5
pfam k141_21352 k141_21352_4 3799 4806 + Semialdhyde_dh | Semialdhyde_dhC
pfam k141_21352 k141_21352_5 4894 6708 - SusD_RagB | SusD-like_3
TC k141_21352 k141_21352_6 6716 10039 - 1.B.14.6.1
NULL(UNKNOWN) k141_21352 k141_21352_7 10465 11313 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_21352 k141_21352_8 11870 13069 + GH171
TC k141_21352 k141_21352_9 13107 14561 + 2.A.21.3.7
NULL(UNKNOWN) k141_21352 k141_21352_10 14576 17638 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_21352 k141_21352_11 17707 19581 + Metallophos | PQQ | PQQ | PQQ_2 | PQQ_2 | Beta-prop_ACSF4 | Beta-prop_ACSF4 | Beta-prop_ACSF4 | Beta-prop_ACSF4
CAZyme k141_21352 k141_21352_12 19609 21069 + GT2
Gene ID: k141_21352_1
Type: TC
Location: 63 - 728 (-)
Gene ID: k141_21352_2
Type: pfam
Location: 768 - 1478 (-)
Gene ID: k141_21352_3
Type: TC
Location: 1516 - 3645 (-)
Gene ID: k141_21352_4
Type: pfam
Location: 3799 - 4806 (+)
Gene ID: k141_21352_5
Type: pfam
Location: 4894 - 6708 (-)
Gene ID: k141_21352_6
Type: TC
Location: 6716 - 10039 (-)
Gene ID: k141_21352_7
Type:
Location: 10465 - 11313 (-)
Gene ID: k141_21352_8
Type: CAZyme
Location: 11870 - 13069 (+)
Gene ID: k141_21352_9
Type: TC
Location: 13107 - 14561 (+)
Gene ID: k141_21352_10
Type:
Location: 14576 - 17638 (+)
Gene ID: k141_21352_11
Type: pfam
Location: 17707 - 19581 (+)
Gene ID: k141_21352_12
Type: CAZyme
Location: 19609 - 21069 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_21352_5 vegan > omnivore 2.60851 0.04571
k141_21352_6 vegan > omnivore 2.11199 0.04571

🧭 Explore Read Mapping of CGC

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