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Cluster: CGMR025404_CGC57

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_203433 k141_203433_32 43880 45325 + 2.A.66.2.6
CAZyme k141_203433 k141_203433_33 45322 46239 + GT14
CAZyme k141_203433 k141_203433_34 46242 47420 + GT4
CAZyme k141_203433 k141_203433_35 47417 48547 + GT4
CAZyme k141_203433 k141_203433_36 48569 49783 + GT4
pfam k141_203433 k141_203433_37 49804 50952 - Epimerase_2
pfam k141_203433 k141_203433_38 51054 52253 - UDPG_MGDP_dh | NAD_binding_2 | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
CAZyme k141_203433 k141_203433_39 52371 53636 + GT4
CAZyme k141_203433 k141_203433_40 53629 54375 + GT2
Gene ID: k141_203433_32
Type: TC
Location: 43880 - 45325 (+)
Gene ID: k141_203433_33
Type: CAZyme
Location: 45322 - 46239 (+)
Gene ID: k141_203433_34
Type: CAZyme
Location: 46242 - 47420 (+)
Gene ID: k141_203433_35
Type: CAZyme
Location: 47417 - 48547 (+)
Gene ID: k141_203433_36
Type: CAZyme
Location: 48569 - 49783 (+)
Gene ID: k141_203433_37
Type: pfam
Location: 49804 - 50952 (-)
Gene ID: k141_203433_38
Type: pfam
Location: 51054 - 52253 (-)
Gene ID: k141_203433_39
Type: CAZyme
Location: 52371 - 53636 (+)
Gene ID: k141_203433_40
Type: CAZyme
Location: 53629 - 54375 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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