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Cluster: CGMR025404_CGC54

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_42225 k141_42225_17 19738 21891 - GH97
TC k141_42225 k141_42225_18 22317 22694 + 1.A.43.1.1
pfam k141_42225 k141_42225_19 22709 23377 + Pentapeptide | Pentapeptide | Pentapeptide | Pentapeptide_4
pfam k141_42225 k141_42225_20 23442 24722 + Enolase_C | Enolase_N | MR_MLE_C
CAZyme k141_42225 k141_42225_21 24823 27075 - GH3
CAZyme k141_42225 k141_42225_22 27078 28370 - GH158
pfam k141_42225 k141_42225_23 28510 29382 - PKD
pfam k141_42225 k141_42225_24 29412 30944 - SusD_RagB | SusD-like_2 | SusD-like_3
TC k141_42225 k141_42225_25 30966 34148 - 1.B.14.6.1
Gene ID: k141_42225_17
Type: CAZyme
Location: 19738 - 21891 (-)
Gene ID: k141_42225_18
Type: TC
Location: 22317 - 22694 (+)
Gene ID: k141_42225_19
Type: pfam
Location: 22709 - 23377 (+)
Gene ID: k141_42225_20
Type: pfam
Location: 23442 - 24722 (+)
Gene ID: k141_42225_21
Type: CAZyme
Location: 24823 - 27075 (-)
Gene ID: k141_42225_22
Type: CAZyme
Location: 27078 - 28370 (-)
Gene ID: k141_42225_23
Type: pfam
Location: 28510 - 29382 (-)
Gene ID: k141_42225_24
Type: pfam
Location: 29412 - 30944 (-)
Gene ID: k141_42225_25
Type: TC
Location: 30966 - 34148 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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