dbCAN Logo

Cluster: CGMR025404_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_169499 k141_169499_28 36863 40414 + 1.B.14.6.1
pfam k141_169499 k141_169499_29 40431 42434 + SusD_RagB | SusD-like_3
NULL(UNKNOWN) k141_169499 k141_169499_30 42501 42926 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_169499 k141_169499_31 43093 45543 + GH2
CAZyme k141_169499 k141_169499_32 45565 47901 + GH35
STP k141_169499 k141_169499_33 48090 48641 - Sigma70_r2 | Sigma70_r4_2
pfam k141_169499 k141_169499_34 48892 49410 - MGS
CAZyme k141_169499 k141_169499_35 49457 50473 - GT2
pfam k141_169499 k141_169499_36 50466 51365 - Lip_A_acyltrans
pfam k141_169499 k141_169499_37 51381 52700 - UPF0004 | Radical_SAM
TC k141_169499 k141_169499_38 52786 54459 + 4.C.1.1.4
Gene ID: k141_169499_28
Type: TC
Location: 36863 - 40414 (+)
Gene ID: k141_169499_29
Type: pfam
Location: 40431 - 42434 (+)
Gene ID: k141_169499_30
Type:
Location: 42501 - 42926 (+)
Gene ID: k141_169499_31
Type: CAZyme
Location: 43093 - 45543 (+)
Gene ID: k141_169499_32
Type: CAZyme
Location: 45565 - 47901 (+)
Gene ID: k141_169499_33
Type: STP
Location: 48090 - 48641 (-)
Gene ID: k141_169499_34
Type: pfam
Location: 48892 - 49410 (-)
Gene ID: k141_169499_35
Type: CAZyme
Location: 49457 - 50473 (-)
Gene ID: k141_169499_36
Type: pfam
Location: 50466 - 51365 (-)
Gene ID: k141_169499_37
Type: pfam
Location: 51381 - 52700 (-)
Gene ID: k141_169499_38
Type: TC
Location: 52786 - 54459 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List