Cluster: CGMR025404_CGC37
🧬 Cluster Details
- Gene Count: 19
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR025404
- CGC Family ID: CGCFAM_08407
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_94231 | k141_94231_25 | 26024 | 27115 | + | 8.A.1.1.2 |
| NULL(UNKNOWN) | k141_94231 | k141_94231_26 | 27129 | 28769 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | k141_94231 | k141_94231_27 | 28806 | 29672 | + | HTH_AraC |
| TC | k141_94231 | k141_94231_28 | 30046 | 31854 | - | 8.A.46.1.6 |
| TC | k141_94231 | k141_94231_29 | 31885 | 34995 | - | 1.B.14.6.1 |
| NULL(UNKNOWN) | k141_94231 | k141_94231_30 | 34997 | 35164 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | k141_94231 | k141_94231_31 | 35385 | 39413 | + | HTH_AraC |
| TC | k141_94231 | k141_94231_32 | 39492 | 40643 | - | 2.A.1.7.16 |
| NULL(UNKNOWN) | k141_94231 | k141_94231_33 | 40662 | 42590 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_94231 | k141_94231_34 | 42608 | 44758 | - | GH67 |
| CAZyme | k141_94231 | k141_94231_35 | 44774 | 46720 | - | GH97 |
| CAZyme | k141_94231 | k141_94231_36 | 46741 | 47868 | - | GH105 |
| CAZyme | k141_94231 | k141_94231_37 | 47877 | 49355 | - | GH125 |
| CAZyme | k141_94231 | k141_94231_38 | 49371 | 50564 | - | GH76 |
| TC | k141_94231 | k141_94231_39 | 50892 | 52331 | - | 2.A.21.9.1 |
| pfam | k141_94231 | k141_94231_40 | 52352 | 53473 | - | KdpD |
| TC | k141_94231 | k141_94231_41 | 53623 | 54195 | - | 3.A.3.7.2 |
| TC | k141_94231 | k141_94231_42 | 54208 | 56256 | - | 3.A.3.7.2 |
| TC | k141_94231 | k141_94231_43 | 56289 | 57995 | - | 3.A.3.7.2 |
Gene ID: k141_94231_25
Type: TC
Location: 26024 - 27115 (+)
Type: TC
Location: 26024 - 27115 (+)
Gene ID: k141_94231_26
Type:
Location: 27129 - 28769 (+)
Type:
Location: 27129 - 28769 (+)
Gene ID: k141_94231_27
Type: TF
Location: 28806 - 29672 (+)
Type: TF
Location: 28806 - 29672 (+)
Gene ID: k141_94231_28
Type: TC
Location: 30046 - 31854 (-)
Type: TC
Location: 30046 - 31854 (-)
Gene ID: k141_94231_29
Type: TC
Location: 31885 - 34995 (-)
Type: TC
Location: 31885 - 34995 (-)
Gene ID: k141_94231_30
Type:
Location: 34997 - 35164 (+)
Type:
Location: 34997 - 35164 (+)
Gene ID: k141_94231_31
Type: TF
Location: 35385 - 39413 (+)
Type: TF
Location: 35385 - 39413 (+)
Gene ID: k141_94231_32
Type: TC
Location: 39492 - 40643 (-)
Type: TC
Location: 39492 - 40643 (-)
Gene ID: k141_94231_33
Type:
Location: 40662 - 42590 (-)
Type:
Location: 40662 - 42590 (-)
Gene ID: k141_94231_34
Type: CAZyme
Location: 42608 - 44758 (-)
Type: CAZyme
Location: 42608 - 44758 (-)
Gene ID: k141_94231_35
Type: CAZyme
Location: 44774 - 46720 (-)
Type: CAZyme
Location: 44774 - 46720 (-)
Gene ID: k141_94231_36
Type: CAZyme
Location: 46741 - 47868 (-)
Type: CAZyme
Location: 46741 - 47868 (-)
Gene ID: k141_94231_37
Type: CAZyme
Location: 47877 - 49355 (-)
Type: CAZyme
Location: 47877 - 49355 (-)
Gene ID: k141_94231_38
Type: CAZyme
Location: 49371 - 50564 (-)
Type: CAZyme
Location: 49371 - 50564 (-)
Gene ID: k141_94231_39
Type: TC
Location: 50892 - 52331 (-)
Type: TC
Location: 50892 - 52331 (-)
Gene ID: k141_94231_40
Type: pfam
Location: 52352 - 53473 (-)
Type: pfam
Location: 52352 - 53473 (-)
Gene ID: k141_94231_41
Type: TC
Location: 53623 - 54195 (-)
Type: TC
Location: 53623 - 54195 (-)
Gene ID: k141_94231_42
Type: TC
Location: 54208 - 56256 (-)
Type: TC
Location: 54208 - 56256 (-)
Gene ID: k141_94231_43
Type: TC
Location: 56289 - 57995 (-)
Type: TC
Location: 56289 - 57995 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides fluxus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.