Cluster: CGMR025404_CGC36
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate: pectin/galactan/beta-glucan/xylan/beta-mannan/host glycan
- Genome ID: CGMR025404
- CGC Family ID: CGCFAM_00001
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_167704 | k141_167704_6 | 7124 | 9838 | + | GH2 |
| CAZyme | k141_167704 | k141_167704_7 | 9948 | 11036 | - | GH43_24 |
| pfam | k141_167704 | k141_167704_8 | 11136 | 13193 | - | SusD_RagB | SusD-like_3 |
| TC | k141_167704 | k141_167704_9 | 13256 | 16522 | - | 1.B.14.6.1 |
| TF | k141_167704 | k141_167704_10 | 16751 | 20881 | - | HTH_AraC |
| CAZyme | k141_167704 | k141_167704_11 | 21174 | 24269 | - | GH2 |
Gene ID: k141_167704_6
Type: CAZyme
Location: 7124 - 9838 (+)
Type: CAZyme
Location: 7124 - 9838 (+)
Gene ID: k141_167704_7
Type: CAZyme
Location: 9948 - 11036 (-)
Type: CAZyme
Location: 9948 - 11036 (-)
Gene ID: k141_167704_8
Type: pfam
Location: 11136 - 13193 (-)
Type: pfam
Location: 11136 - 13193 (-)
Gene ID: k141_167704_9
Type: TC
Location: 13256 - 16522 (-)
Type: TC
Location: 13256 - 16522 (-)
Gene ID: k141_167704_10
Type: TF
Location: 16751 - 20881 (-)
Type: TF
Location: 16751 - 20881 (-)
Gene ID: k141_167704_11
Type: CAZyme
Location: 21174 - 24269 (-)
Type: CAZyme
Location: 21174 - 24269 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides fluxus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.