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Cluster: CGMR025404_CGC33

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_40720 k141_40720_16 12005 13657 - GH27
pfam k141_40720 k141_40720_17 14085 15227 + Acyl_transf_3
pfam k141_40720 k141_40720_18 15248 15634 + rhaM
TC k141_40720 k141_40720_19 15982 19158 + 1.B.14.6.1
pfam k141_40720 k141_40720_20 19201 20880 + SusD_RagB | SusD-like_3
NULL(UNKNOWN) k141_40720 k141_40720_21 20913 22715 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_40720 k141_40720_22 22843 24516 - CBM91 | GH43_12
CAZyme k141_40720 k141_40720_23 24653 26398 + GH5_4
TF k141_40720 k141_40720_24 26639 30697 + HTH_AraC
CAZyme k141_40720 k141_40720_25 30834 33710 + GH31_4
CAZyme k141_40720 k141_40720_26 33725 36331 + GH2
CAZyme k141_40720 k141_40720_27 36406 38619 + GH3
CAZyme k141_40720 k141_40720_28 38828 41332 + GH95
Gene ID: k141_40720_16
Type: CAZyme
Location: 12005 - 13657 (-)
Gene ID: k141_40720_17
Type: pfam
Location: 14085 - 15227 (+)
Gene ID: k141_40720_18
Type: pfam
Location: 15248 - 15634 (+)
Gene ID: k141_40720_19
Type: TC
Location: 15982 - 19158 (+)
Gene ID: k141_40720_20
Type: pfam
Location: 19201 - 20880 (+)
Gene ID: k141_40720_21
Type:
Location: 20913 - 22715 (+)
Gene ID: k141_40720_22
Type: CAZyme
Location: 22843 - 24516 (-)
Gene ID: k141_40720_23
Type: CAZyme
Location: 24653 - 26398 (+)
Gene ID: k141_40720_24
Type: TF
Location: 26639 - 30697 (+)
Gene ID: k141_40720_25
Type: CAZyme
Location: 30834 - 33710 (+)
Gene ID: k141_40720_26
Type: CAZyme
Location: 33725 - 36331 (+)
Gene ID: k141_40720_27
Type: CAZyme
Location: 36406 - 38619 (+)
Gene ID: k141_40720_28
Type: CAZyme
Location: 38828 - 41332 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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