Cluster: CGMR025404_CGC31
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: pectin/alpha-glucan
- Genome ID: CGMR025404
- CGC Family ID: CGCFAM_00025
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_54293 | k141_54293_1 | 118 | 3147 | + | 1.B.14.6.1 |
| TC | k141_54293 | k141_54293_2 | 3160 | 4854 | + | 8.A.46.1.1 |
| pfam | k141_54293 | k141_54293_3 | 4883 | 6019 | + | SusE | SusF_SusE |
| NULL(UNKNOWN) | k141_54293 | k141_54293_4 | 6043 | 7458 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_54293 | k141_54293_5 | 7548 | 10127 | + | GH13_10 |
| TC | k141_54293 | k141_54293_6 | 10298 | 11278 | - | 1.B.57.4.3 |
Gene ID: k141_54293_1
Type: TC
Location: 118 - 3147 (+)
Type: TC
Location: 118 - 3147 (+)
Gene ID: k141_54293_2
Type: TC
Location: 3160 - 4854 (+)
Type: TC
Location: 3160 - 4854 (+)
Gene ID: k141_54293_3
Type: pfam
Location: 4883 - 6019 (+)
Type: pfam
Location: 4883 - 6019 (+)
Gene ID: k141_54293_4
Type:
Location: 6043 - 7458 (+)
Type:
Location: 6043 - 7458 (+)
Gene ID: k141_54293_5
Type: CAZyme
Location: 7548 - 10127 (+)
Type: CAZyme
Location: 7548 - 10127 (+)
Gene ID: k141_54293_6
Type: TC
Location: 10298 - 11278 (-)
Type: TC
Location: 10298 - 11278 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides fluxus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.