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Cluster: CGMR025404_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_27709 k141_27709_12 10569 12383 - 3.A.1.106.1
CAZyme k141_27709 k141_27709_13 12618 13790 + GT4
pfam k141_27709 k141_27709_14 13838 15064 - Glycos_transf_1 | Glyco_trans_1_2 | Glyco_trans_1_4
CAZyme k141_27709 k141_27709_15 15069 16133 - GT2
pfam k141_27709 k141_27709_16 16157 17293 - Glycos_transf_1 | Glyco_trans_1_4
pfam k141_27709 k141_27709_17 17568 18173 + DUF4254
CAZyme k141_27709 k141_27709_18 18170 19222 + GT9
pfam k141_27709 k141_27709_19 19197 20321 + Amino_oxidase | GLF | NAD_binding_8
CAZyme k141_27709 k141_27709_20 20351 21187 - GT2
CAZyme k141_27709 k141_27709_21 21172 22122 - GT8
CAZyme k141_27709 k141_27709_22 22135 23352 - GT113
Gene ID: k141_27709_12
Type: TC
Location: 10569 - 12383 (-)
Gene ID: k141_27709_13
Type: CAZyme
Location: 12618 - 13790 (+)
Gene ID: k141_27709_14
Type: pfam
Location: 13838 - 15064 (-)
Gene ID: k141_27709_15
Type: CAZyme
Location: 15069 - 16133 (-)
Gene ID: k141_27709_16
Type: pfam
Location: 16157 - 17293 (-)
Gene ID: k141_27709_17
Type: pfam
Location: 17568 - 18173 (+)
Gene ID: k141_27709_18
Type: CAZyme
Location: 18170 - 19222 (+)
Gene ID: k141_27709_19
Type: pfam
Location: 19197 - 20321 (+)
Gene ID: k141_27709_20
Type: CAZyme
Location: 20351 - 21187 (-)
Gene ID: k141_27709_21
Type: CAZyme
Location: 21172 - 22122 (-)
Gene ID: k141_27709_22
Type: CAZyme
Location: 22135 - 23352 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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