Cluster: CGMR025404_CGC16
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 7
- Substrate:
- Genome ID: CGMR025404
- CGC Family ID: CGCFAM_05469
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_146693 | k141_146693_64 | 84479 | 85969 | + | GH30_3 |
| CAZyme | k141_146693 | k141_146693_65 | 85990 | 87240 | + | GH5_46 |
| CAZyme | k141_146693 | k141_146693_66 | 87498 | 89729 | + | GH3 |
| pfam | k141_146693 | k141_146693_67 | 89853 | 91031 | - | AP_endonuc_2 | UxuA |
| pfam | k141_146693 | k141_146693_68 | 91216 | 92025 | - | adh_short | Epimerase | KR | adh_short_C2 |
| CAZyme | k141_146693 | k141_146693_69 | 92196 | 94622 | - | GH2 |
| CAZyme | k141_146693 | k141_146693_70 | 94643 | 97009 | - | GH88 | PL38 |
| CAZyme | k141_146693 | k141_146693_71 | 97033 | 99648 | - | CBM57 | GH2 |
| CAZyme | k141_146693 | k141_146693_72 | 99872 | 102850 | - | GH55_3 |
| pfam | k141_146693 | k141_146693_73 | 102872 | 103921 | - | DUF4466 | DUF4466 |
| NULL(UNKNOWN) | k141_146693 | k141_146693_74 | 103959 | 104351 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_146693 | k141_146693_75 | 104391 | 106145 | - | 8.A.46.1.3 |
| TC | k141_146693 | k141_146693_76 | 106169 | 109207 | - | 1.B.14.6.1 |
Gene ID: k141_146693_64
Type: CAZyme
Location: 84479 - 85969 (+)
Type: CAZyme
Location: 84479 - 85969 (+)
Gene ID: k141_146693_65
Type: CAZyme
Location: 85990 - 87240 (+)
Type: CAZyme
Location: 85990 - 87240 (+)
Gene ID: k141_146693_66
Type: CAZyme
Location: 87498 - 89729 (+)
Type: CAZyme
Location: 87498 - 89729 (+)
Gene ID: k141_146693_67
Type: pfam
Location: 89853 - 91031 (-)
Type: pfam
Location: 89853 - 91031 (-)
Gene ID: k141_146693_68
Type: pfam
Location: 91216 - 92025 (-)
Type: pfam
Location: 91216 - 92025 (-)
Gene ID: k141_146693_69
Type: CAZyme
Location: 92196 - 94622 (-)
Type: CAZyme
Location: 92196 - 94622 (-)
Gene ID: k141_146693_70
Type: CAZyme
Location: 94643 - 97009 (-)
Type: CAZyme
Location: 94643 - 97009 (-)
Gene ID: k141_146693_71
Type: CAZyme
Location: 97033 - 99648 (-)
Type: CAZyme
Location: 97033 - 99648 (-)
Gene ID: k141_146693_72
Type: CAZyme
Location: 99872 - 102850 (-)
Type: CAZyme
Location: 99872 - 102850 (-)
Gene ID: k141_146693_73
Type: pfam
Location: 102872 - 103921 (-)
Type: pfam
Location: 102872 - 103921 (-)
Gene ID: k141_146693_74
Type:
Location: 103959 - 104351 (-)
Type:
Location: 103959 - 104351 (-)
Gene ID: k141_146693_75
Type: TC
Location: 104391 - 106145 (-)
Type: TC
Location: 104391 - 106145 (-)
Gene ID: k141_146693_76
Type: TC
Location: 106169 - 109207 (-)
Type: TC
Location: 106169 - 109207 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Species
Bacteroides fluxus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.