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Cluster: CGMR025312_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_23816 k141_23816_55 60458 61921 + 2.A.3.2.3
TC k141_23816 k141_23816_56 62374 64734 + 9.A.8.1.6
TC k141_23816 k141_23816_57 65049 66713 + 4.A.1.1.3
TF k141_23816 k141_23816_58 66776 67528 - HTH_6
CAZyme k141_23816 k141_23816_59 67704 69077 + GH4
NULL(UNKNOWN) k141_23816 k141_23816_60 69243 69995 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_23816 k141_23816_61 70171 71367 + 2.A.1.2.18
CAZyme k141_23816 k141_23816_62 71522 72898 + GH13_20
Gene ID: k141_23816_55
Type: TC
Location: 60458 - 61921 (+)
Gene ID: k141_23816_56
Type: TC
Location: 62374 - 64734 (+)
Gene ID: k141_23816_57
Type: TC
Location: 65049 - 66713 (+)
Gene ID: k141_23816_58
Type: TF
Location: 66776 - 67528 (-)
Gene ID: k141_23816_59
Type: CAZyme
Location: 67704 - 69077 (+)
Gene ID: k141_23816_60
Type:
Location: 69243 - 69995 (+)
Gene ID: k141_23816_61
Type: TC
Location: 70171 - 71367 (+)
Gene ID: k141_23816_62
Type: CAZyme
Location: 71522 - 72898 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_23816_55 vegan > omnivore 1.46631 0.02280
k141_23816_59 vegan > omnivore 1.40563 0.02280
k141_23816_60 vegan > omnivore 1.64588 0.02280

🧭 Explore Read Mapping of CGC

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