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Cluster: CGMR025312_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_47716 k141_47716_80 95734 96483 + 9.B.18.1.2
pfam k141_47716 k141_47716_81 96522 97781 + UDPG_MGDP_dh | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
pfam k141_47716 k141_47716_82 97785 98258 + Alg14
CAZyme k141_47716 k141_47716_83 98271 98762 + GT1
pfam k141_47716 k141_47716_84 98759 99652 + ATPgrasp_TupA
CAZyme k141_47716 k141_47716_85 99652 100722 + GT4
NULL(UNKNOWN) k141_47716 k141_47716_86 100724 101980 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_47716 k141_47716_87 101983 102963 + GT2
TC k141_47716 k141_47716_88 102970 104430 + 2.A.66.2.2
Gene ID: k141_47716_80
Type: TC
Location: 95734 - 96483 (+)
Gene ID: k141_47716_81
Type: pfam
Location: 96522 - 97781 (+)
Gene ID: k141_47716_82
Type: pfam
Location: 97785 - 98258 (+)
Gene ID: k141_47716_83
Type: CAZyme
Location: 98271 - 98762 (+)
Gene ID: k141_47716_84
Type: pfam
Location: 98759 - 99652 (+)
Gene ID: k141_47716_85
Type: CAZyme
Location: 99652 - 100722 (+)
Gene ID: k141_47716_86
Type:
Location: 100724 - 101980 (+)
Gene ID: k141_47716_87
Type: CAZyme
Location: 101983 - 102963 (+)
Gene ID: k141_47716_88
Type: TC
Location: 102970 - 104430 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_47716_81 vegan > omnivore 1.33136 0.02280

🧭 Explore Read Mapping of CGC

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