dbCAN Logo

Cluster: CGMR024812_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_3368 k141_3368_3 2346 2909 + 9.B.46.1.1
pfam k141_3368 k141_3368_4 2915 3055 + AgrD
TC k141_3368 k141_3368_5 3080 4369 + 9.B.14.1.13
TF k141_3368 k141_3368_6 4386 5102 + LytTR
STP k141_3368 k141_3368_7 5170 6129 - PfkB
CAZyme k141_3368 k141_3368_8 6136 7608 - GH32
TF k141_3368 k141_3368_9 7868 8821 - LacI
TC k141_3368 k141_3368_10 8956 10206 - 1.A.11.1.4
TC k141_3368 k141_3368_11 10626 10850 - 9.B.102.1.12
TC k141_3368 k141_3368_12 10902 11954 - 9.B.102.1.2
NULL(UNKNOWN) k141_3368 k141_3368_13 12040 12321 - NULL(UNKNOWN)
[View Structural Homologs]
TF k141_3368 k141_3368_14 12467 13102 - 0045030
TC k141_3368 k141_3368_15 13450 15384 + 3.A.1.121.4
Gene ID: k141_3368_3
Type: TC
Location: 2346 - 2909 (+)
Gene ID: k141_3368_4
Type: pfam
Location: 2915 - 3055 (+)
Gene ID: k141_3368_5
Type: TC
Location: 3080 - 4369 (+)
Gene ID: k141_3368_6
Type: TF
Location: 4386 - 5102 (+)
Gene ID: k141_3368_7
Type: STP
Location: 5170 - 6129 (-)
Gene ID: k141_3368_8
Type: CAZyme
Location: 6136 - 7608 (-)
Gene ID: k141_3368_9
Type: TF
Location: 7868 - 8821 (-)
Gene ID: k141_3368_10
Type: TC
Location: 8956 - 10206 (-)
Gene ID: k141_3368_11
Type: TC
Location: 10626 - 10850 (-)
Gene ID: k141_3368_12
Type: TC
Location: 10902 - 11954 (-)
Gene ID: k141_3368_13
Type:
Location: 12040 - 12321 (-)
Gene ID: k141_3368_14
Type: TF
Location: 12467 - 13102 (-)
Gene ID: k141_3368_15
Type: TC
Location: 13450 - 15384 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List