Cluster: CGMR024812_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR024812
- CGC Family ID: CGCFAM_00102
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_30683 | k141_30683_9 | 6114 | 7622 | - | GT4 |
| TC | k141_30683 | k141_30683_10 | 7640 | 10030 | - | 3.A.5.10.1 |
| pfam | k141_30683 | k141_30683_11 | 10023 | 10595 | - | Sec-ASP3 |
| TC | k141_30683 | k141_30683_12 | 10582 | 12141 | - | 3.A.5.10.1 |
| TC | k141_30683 | k141_30683_13 | 12131 | 13687 | - | 3.A.5.10.1 |
| TC | k141_30683 | k141_30683_14 | 13705 | 14904 | - | 3.A.5.10.1 |
Gene ID: k141_30683_9
Type: CAZyme
Location: 6114 - 7622 (-)
Type: CAZyme
Location: 6114 - 7622 (-)
Gene ID: k141_30683_10
Type: TC
Location: 7640 - 10030 (-)
Type: TC
Location: 7640 - 10030 (-)
Gene ID: k141_30683_11
Type: pfam
Location: 10023 - 10595 (-)
Type: pfam
Location: 10023 - 10595 (-)
Gene ID: k141_30683_12
Type: TC
Location: 10582 - 12141 (-)
Type: TC
Location: 10582 - 12141 (-)
Gene ID: k141_30683_13
Type: TC
Location: 12131 - 13687 (-)
Type: TC
Location: 12131 - 13687 (-)
Gene ID: k141_30683_14
Type: TC
Location: 13705 - 14904 (-)
Type: TC
Location: 13705 - 14904 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Staphylococcales
Family
Staphylococcaceae
Genus
Staphylococcus
Species
Staphylococcus epidermidis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.