Cluster: CGMR024805_CGC6
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR024805
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_287723 | k141_287723_139 | 162347 | 163192 | - | 3.A.1.1.34 |
| TC | k141_287723 | k141_287723_140 | 163194 | 164093 | - | 3.A.1.1.34 |
| TC | k141_287723 | k141_287723_141 | 164124 | 165470 | - | 3.A.1.1.34 |
| TF | k141_287723 | k141_287723_142 | 165611 | 167203 | - | HTH_AraC |
| TC | k141_287723 | k141_287723_143 | 167217 | 169025 | - | 8.A.59.2.1 |
| pfam | k141_287723 | k141_287723_144 | 170421 | 170792 | - | adh_short | adh_short_C2 |
| pfam | k141_287723 | k141_287723_145 | 170856 | 171194 | - | adh_short | KR | adh_short_C2 |
| CAZyme | k141_287723 | k141_287723_146 | 171463 | 174567 | + | GH38 |
Gene ID: k141_287723_139
Type: TC
Location: 162347 - 163192 (-)
Type: TC
Location: 162347 - 163192 (-)
Gene ID: k141_287723_140
Type: TC
Location: 163194 - 164093 (-)
Type: TC
Location: 163194 - 164093 (-)
Gene ID: k141_287723_141
Type: TC
Location: 164124 - 165470 (-)
Type: TC
Location: 164124 - 165470 (-)
Gene ID: k141_287723_142
Type: TF
Location: 165611 - 167203 (-)
Type: TF
Location: 165611 - 167203 (-)
Gene ID: k141_287723_143
Type: TC
Location: 167217 - 169025 (-)
Type: TC
Location: 167217 - 169025 (-)
Gene ID: k141_287723_144
Type: pfam
Location: 170421 - 170792 (-)
Type: pfam
Location: 170421 - 170792 (-)
Gene ID: k141_287723_145
Type: pfam
Location: 170856 - 171194 (-)
Type: pfam
Location: 170856 - 171194 (-)
Gene ID: k141_287723_146
Type: CAZyme
Location: 171463 - 174567 (+)
Type: CAZyme
Location: 171463 - 174567 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.