Cluster: CGMR024805_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate: pectin
- Genome ID: CGMR024805
- CGC Family ID: CGCFAM_00378
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_287723 | k141_287723_84 | 86479 | 87507 | - | GH179 |
| TF | k141_287723 | k141_287723_85 | 87507 | 88277 | - | HTH_AraC |
| TC | k141_287723 | k141_287723_86 | 88265 | 89980 | - | 8.A.59.2.1 |
| STP | k141_287723 | k141_287723_87 | 90232 | 91593 | + | SBP_bac_1 |
| TC | k141_287723 | k141_287723_88 | 91615 | 92532 | + | 3.A.1.1.11 |
| TC | k141_287723 | k141_287723_89 | 92539 | 93378 | + | 3.A.1.1.11 |
Gene ID: k141_287723_84
Type: CAZyme
Location: 86479 - 87507 (-)
Type: CAZyme
Location: 86479 - 87507 (-)
Gene ID: k141_287723_85
Type: TF
Location: 87507 - 88277 (-)
Type: TF
Location: 87507 - 88277 (-)
Gene ID: k141_287723_86
Type: TC
Location: 88265 - 89980 (-)
Type: TC
Location: 88265 - 89980 (-)
Gene ID: k141_287723_87
Type: STP
Location: 90232 - 91593 (+)
Type: STP
Location: 90232 - 91593 (+)
Gene ID: k141_287723_88
Type: TC
Location: 91615 - 92532 (+)
Type: TC
Location: 91615 - 92532 (+)
Gene ID: k141_287723_89
Type: TC
Location: 92539 - 93378 (+)
Type: TC
Location: 92539 - 93378 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.